RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 PDLIM4P50479 330 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 RAC3P60763 192 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 TMEM267Q0VDI3 215 aaPredicted RBP11.71□□□□□ -0.53
RAB40A-202ENST00000372633 LRRC75BQ2VPJ9 315 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 SLC25A24Q6NUK1 477 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 LCN15Q6UWW0 184 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 C1QTNF5Q9BXJ0 243 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 H3BP45 60 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 MDH2P40926 338 aaKnown RBP11.71□□□□□ -0.53
RAB40A-202ENST00000372633 COL10A1Q03692 680 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 CLN3Q13286 438 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 ZNF124Q15973 351 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 CYP2G1PQ6ZSU1 146 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 ZNF664Q8N3J9 261 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 ZNF784Q8NCA9 323 aaPredicted RBP11.71□□□□□ -0.53
RAB40A-202ENST00000372633 NAT8Q9UHE5 227 aa11.71□□□□□ -0.53
RAB40A-202ENST00000372633 TNRC6BQ9UPQ9 1833 aaKnown RBP11.71□□□□□ -0.53
RAB40A-202ENST00000372633 ZNF716A6NP11 495 aa11.71□□□□□ -0.54
RAB40A-202ENST00000372633 CNOT4O95628 575 aaKnown RBP11.71□□□□□ -0.54
RAB40A-202ENST00000372633 PCBD1P61457 104 aa11.71□□□□□ -0.54
RAB40A-202ENST00000372633 ARL16Q0P5N6 197 aa11.71□□□□□ -0.54
RAB40A-202ENST00000372633 ZNF468Q5VIY5 522 aaPredicted RBP11.71□□□□□ -0.54
RAB40A-202ENST00000372633 Q6ZRM9 215 aa11.71□□□□□ -0.54
RAB40A-202ENST00000372633 COLCA1Q6ZS62 124 aa11.71□□□□□ -0.54
RAB40A-202ENST00000372633 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.54
RAB40A-202ENST00000372633 PRDM14Q9GZV8 571 aa11.71□□□□□ -0.54
RAB40A-202ENST00000372633 GJE1A6NN92 205 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 FGF8P55075 233 aaPredicted RBP11.7□□□□□ -0.54
RAB40A-202ENST00000372633 RIPPLY2Q5TAB7 128 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 HAPLN4Q86UW8 402 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 LILRB2Q8N423 598 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 LSM10Q969L4 123 aaKnown RBP11.7□□□□□ -0.54
RAB40A-202ENST00000372633 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 FOXB1Q99853 325 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 CHD3Q12873 2000 aaKnown RBP11.7□□□□□ -0.54
RAB40A-202ENST00000372633 TRBV6-6A0A0A6YYG2 114 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 TNFSF12O43508 249 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 GCGP01275 180 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 CD55P08174 381 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 CELA2AP08217 269 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 SPCS3P61009 180 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 TMEM41BQ5BJD5 291 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 ZNF324BQ6AW86 544 aaPredicted RBP11.7□□□□□ -0.54
RAB40A-202ENST00000372633 OR51G1Q8NGK1 321 aa11.7□□□□□ -0.54
RAB40A-202ENST00000372633 PINX1Q96BK5 328 aaKnown RBP11.7□□□□□ -0.54
RAB40A-202ENST00000372633 ALKBH3Q96Q83 286 aaPredicted RBP11.7□□□□□ -0.54
RAB40A-202ENST00000372633 FGF23Q9GZV9 251 aaPredicted RBP11.7□□□□□ -0.54
RAB40A-202ENST00000372633 CEBPZOSA8MTT3 80 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 IFNA1P01562 189 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 MMP7P09237 267 aaPredicted RBP11.69□□□□□ -0.54
RAB40A-202ENST00000372633 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
RAB40A-202ENST00000372633 B3GALT5-AS1P59052 145 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 RBKSQ9H477 322 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 AKIRIN1Q9H9L7 192 aaPredicted RBP11.69□□□□□ -0.54
RAB40A-202ENST00000372633 SYNGR2O43760 224 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 IL18BPO95998 194 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 KIAA2026Q5HYC2 2103 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 NCR3LG1Q68D85 454 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 ACY3Q96HD9 319 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 RIMS4Q9H426 269 aaPredicted RBP11.69□□□□□ -0.54
RAB40A-202ENST00000372633 OR2W1Q9Y3N9 320 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 TNRC6AQ8NDV7 1962 aaKnown RBP11.69□□□□□ -0.54
RAB40A-202ENST00000372633 CBR3O75828 277 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 JMJD7P0C870 316 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 S100GP29377 79 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 SSX2Q16385 188 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 TMEM241Q24JQ0 296 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 AAED1Q7RTV5 226 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 C16orf82Q7Z2V1 217 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 C17orf78Q8N4C9 275 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 IMMP1LQ96LU5 166 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 HIST1H2AAQ96QV6 131 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 NEU1Q99519 415 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 PRSS50Q9UI38 385 aa11.69□□□□□ -0.54
RAB40A-202ENST00000372633 CFAP54Q96N23 3096 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 MAP1LC3B2A6NCE7 125 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 KBTBD11O94819 623 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 IGKV1-39P01597 117 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 IGKV1D-39P04432 117 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 SERPINE2P07093 398 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 PSG2P11465 335 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 RAB4BP61018 213 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 CEACAM16Q2WEN9 425 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
RAB40A-202ENST00000372633 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
RAB40A-202ENST00000372633 MAP1LC3BQ9GZQ8 125 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 WDR61Q9GZS3 305 aaKnown RBP11.68□□□□□ -0.54
RAB40A-202ENST00000372633 WDR54Q9H977 334 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 WNT16Q9UBV4 365 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 IGHV1-45A0A0A0MS14 117 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 ZNF737O75373 536 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 METTL15P1P0C7V9 234 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 GZMHP20718 246 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 GGNQ86UU5 652 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 SMIM7Q9BQ49 75 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 PSENENQ9NZ42 101 aa11.68□□□□□ -0.54
RAB40A-202ENST00000372633 MTCH1Q9NZJ7 389 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms