RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 SLC25A22Q9H936 323 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 TAAR3PQ9P1P4 343 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 FBLN5Q9UBX5 448 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 TP73-AS1Q9UF72 201 aa4.65□□□□□ -1.67
ATG4A-204ENST00000372246 POLR3KQ9Y2Y1 108 aaPredicted RBP4.65□□□□□ -1.67
ATG4A-204ENST00000372246 AHRRA9YTQ3 701 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IGHG1P01857 330 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 LINC00614P0C842 121 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IRF2P14316 349 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 CCNOP22674 350 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 LINC00205P59089 165 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 TGFBR3Q03167 851 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 ENDOGQ14249 297 aaKnown RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IL13RA2Q14627 380 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 SLC10A1Q14973 349 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 KCNMB1Q16558 191 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM240Q5SV17 173 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 OR8G2PQ6IF36 304 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 HAPLN4Q86UW8 402 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM183AQ8IXX5 376 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF100Q8IYN0 542 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 SELENOHQ8IZQ5 122 aaKnown RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 GPR137CQ8N3F9 429 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 OR10A7Q8NGE5 316 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 OR1N1Q8NGS0 311 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 PIGCQ92535 297 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IMMP2LQ96T52 175 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 NUDT16L1Q9BRJ7 211 aaKnown RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM208Q9BTX3 173 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 DERL1Q9BUN8 251 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 SDF2L1Q9HCN8 221 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IL19Q9UHD0 177 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 RNF114Q9Y508 228 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 DMXL2Q8TDJ6 3036 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IGKV1-6A0A0C4DH72 117 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 KIR2DS5A0A0G2JLQ3 304 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 A0A0G2JNG1 304 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 TRBV11-1A0A0K0K1C0 115 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1W2PNV4 684 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF705FA8MVS1 300 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 TRDCB7Z8K6 153 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 KIR2DS3K7RE56 304 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 M0R135 149 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 DHRS3O75911 302 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 LCATP04180 440 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF705DP0CH99 300 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF705BP0CI00 300 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 FGF5P12034 268 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 B4GALT1P15291 398 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 FGF7P21781 194 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 FBLP22087 321 aaKnown RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 CDKN1AP38936 164 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 UBE2G2P60604 165 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 HERV-K104P61576 105 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 KIR2DS5Q14953 304 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 RIPPLY2Q5TAB7 128 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 SP5Q6BEB4 398 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 SLC25A47Q6Q0C1 308 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IL1F10Q8WWZ1 152 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF799Q96GE5 643 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 RCC1LQ96I51 464 aaKnown RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 ALKBH3Q96Q83 286 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 GABRG3Q99928 467 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 SMIM7Q9BQ49 75 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 PLEKHF2Q9H8W4 249 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 CDH20Q9HBT6 801 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 Q9N2K0 584 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 IL23AQ9NPF7 189 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 LYRM2Q9NU23 88 aaPredicted RBP4.64□□□□□ -1.67
ATG4A-204ENST00000372246 PAM16Q9Y3D7 125 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 TMED3Q9Y3Q3 217 aa4.64□□□□□ -1.67
ATG4A-204ENST00000372246 CACNA1DQ01668 2161 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 A0A087WWC5 75 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 MKRN2OSH3BPM6 223 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 PITX3O75364 302 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 CYB5R3P00387 301 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TFF1P04155 84 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 HSPB1P04792 205 aaKnown RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 BCL2P10415 239 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 PSG2P11465 335 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 PAX1P15863 534 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 GCH1P30793 250 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 GALR1P47211 349 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ARL4DP49703 201 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 CCR5P51681 352 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TDGF1P3P51864 188 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 CD81P60033 236 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 GCSAMLQ5JQS6 135 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 SLC25A26Q70HW3 274 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 VASH2Q86V25 355 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 MCEMP1Q8IX19 187 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF114Q8NC26 417 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 OR10V1Q8NGI7 309 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 NEK7Q8TDX7 302 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TNFRSF14Q92956 283 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF501Q96CX3 271 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 DDIT4LQ96D03 193 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 R3HDM4Q96D70 268 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 PARD6GQ9BYG4 376 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM222Q9H0R3 208 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms