RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 OR13C6PQ8NH95 151 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 EWSR1Q01844 656 aaKnown RBP eCLIP13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 WDR38Q5JTN6 314 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 PROCRQ9UNN8 238 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 TRAV21A0A0B4J279 112 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 CTXND1A0A1B0GTU2 59 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 WDR13Q9H1Z4 485 aa13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 FNDC4Q9H6D8 234 aaPredicted RBP13.55□□□□□ -0.24
GTF3C4-201ENST00000372146 DPRXA6NFQ7 191 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 NPIPB8E9PQR5 432 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 NPIPB9F8W1W9 429 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 NPIPB7O75200 414 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 CCSMST1Q4G0I0 132 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TMEM207Q6UWW9 146 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 SCD5Q86SK9 330 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 LRRC29Q8WV35 223 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 DEFB127Q9H1M4 99 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TMEM202A6NGA9 273 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 ZADH2Q8N4Q0 377 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 ST8SIA1Q92185 356 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 ZNF815PA8K554 130 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 ZNF665Q9H7R5 613 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 ZNF275Q9NSD4 429 aaPredicted RBP13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 CICQ96RK0 1608 aaPredicted RBP13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 A8MWL6 223 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 FHITP49789 147 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 MZB1Q8WU39 189 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 KLF16Q9BXK1 252 aaPredicted RBP13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TREM2Q9NZC2 230 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TMEM189A5PLL7 270 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TRDCB7Z8K6 153 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TMEM189-UBE2V1I3L0A0 370 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 NDUFB3O43676 98 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 HOXD9P28356 352 aaPredicted RBP13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 ADAMTSL4Q6UY14 1074 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 SPSB1Q96BD6 273 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TOPAZ1Q8N9V7 1692 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 NRXN3Q9Y4C0 1643 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TRAV12-3A0A0B4J271 114 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 IGHV4-39P01824 125 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 RNFT1Q5M7Z0 435 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TEPPQ6URK8 271 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 BIVMQ86UB2 503 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 TXNRD2Q9NNW7 524 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 AMMECR1Q9Y4X0 333 aaPredicted RBP13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 NDUFB4O95168 129 aa13.54□□□□□ -0.24
GTF3C4-201ENST00000372146 PTPRDP23468 1912 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 H3BMH7 237 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 NPFFR1Q9GZQ6 430 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 C19orf53Q9UNZ5 99 aaPredicted RBP13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 V9GYH0 126 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 MPDU1O75352 247 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 RFESDQ8TAC1 157 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 GNG3P63215 75 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 HIST1H1AQ02539 215 aaPredicted RBP13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 LDLRAD2Q5SZI1 272 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 IL36RNQ9UBH0 155 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 M0QZQ0 153 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 PLAUP00749 431 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 OR4C3Q8NH37 302 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 MS4A6EQ96DS6 147 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 TIMP4Q99727 224 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 TMEM50AO95807 157 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 TM4SF20Q53R12 229 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 MRGPRDQ8TDS7 321 aa13.53□□□□□ -0.24
GTF3C4-201ENST00000372146 ACVR1Q04771 509 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 PAXXQ9BUH6 204 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 GPR27Q9NS67 375 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 FAM157AC9JC47 383 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 SNAI2O43623 268 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 HTR3DQ70Z44 454 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 TNFRSF14Q92956 283 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 MRGPRFQ96AM1 343 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 DOCK2Q92608 1830 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 OR4A8P0C604 315 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 CD22P20273 847 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 SLC36A1Q7Z2H8 476 aa13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.52□□□□□ -0.24
GTF3C4-201ENST00000372146 SYT8Q8NBV8 401 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 TRAV8-6A0A0B4J262 113 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 CRISPLD2Q9H0B8 497 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 GEMIN7Q9H840 131 aaKnown RBP13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 PCMT1P22061 227 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 GFRA1P56159 465 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 OR10AC1Q8NH08 325 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 ATOH1Q92858 354 aaPredicted RBP13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 PHLDA3Q9Y5J5 127 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 ZNF117Q03924 483 aa13.52□□□□□ -0.25
GTF3C4-201ENST00000372146 ST6GALNAC6Q969X2 333 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 TRAV8-4A0A0B4J246 113 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 BAHD1Q8TBE0 780 aaPredicted RBP13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 FAM216AQ8WUB2 273 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 RFLNAQ6ZTI6 216 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 AMER3Q8N944 861 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 MTCH2Q9Y6C9 303 aa13.51□□□□□ -0.25
GTF3C4-201ENST00000372146 NRIP2Q9BQI9 281 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms