RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 GSKIPQ9P0R6 139 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 PROCRQ9UNN8 238 aa11.92□□□□□ -0.5
LDB3-204ENST00000372066 NUDT19A8MXV4 375 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 CELA3BP08861 270 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 PGA5P0DJD9 388 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 KCNJ3P48549 501 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 PHLDA2Q53GA4 152 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 FAM209AQ5JX71 171 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 SPATA46Q5T0L3 261 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 BEND4Q6ZU67 534 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 MYPOPQ86VE0 399 aaPredicted RBP11.91□□□□□ -0.5
LDB3-204ENST00000372066 LDLRAD3Q86YD5 345 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 SPERTQ8NA61 448 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 RRNAD1Q96FB5 475 aaKnown RBP11.91□□□□□ -0.5
LDB3-204ENST00000372066 ABHD14BQ96IU4 210 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 SPIN2AQ99865 258 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 SPIN2BQ9BPZ2 258 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 NF1P21359 2839 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 HCFC1P51610 2035 aa11.91□□□□□ -0.5
LDB3-204ENST00000372066 PRRC2AP48634 2157 aaKnown RBP11.91□□□□□ -0.5
LDB3-204ENST00000372066 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 C3orf85A0A1B0GTC6 90 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 E5RGE8 158 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 MPPED1O15442 326 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 CDS2O95674 445 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 IGLV1-44P01699 117 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 GAPDHP04406 335 aaKnown RBP11.9□□□□□ -0.5
LDB3-204ENST00000372066 WNT2P09544 360 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 KITLGP21583 273 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 BMP5P22003 454 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 ZNF146Q15072 292 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 OR8G1Q15617 311 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 IGSF11Q5DX21 431 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 Q6P435 159 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 VWA1Q6PCB0 445 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 SEM1Q6ZVN7 128 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 BATF2Q8N1L9 274 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 SCCPDHQ8NBX0 429 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 BVESQ8NE79 360 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 IL22RA2Q969J5 263 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 LRRC46Q96FV0 321 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 NRIP2Q9BQI9 281 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 CYTL1Q9NRR1 136 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 IL36RNQ9UBH0 155 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 NSG2Q9Y328 171 aa11.9□□□□□ -0.5
LDB3-204ENST00000372066 K7EPK0 472 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 PHF1O43189 567 aaPredicted RBP11.89□□□□□ -0.51
LDB3-204ENST00000372066 FGF16O43320 207 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 ZNF44P15621 663 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 MZT1Q08AG7 82 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 C3orf36Q3SXR2 165 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 CMTM1Q8IZ96 169 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 GAPTQ8N292 157 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 FAM71E2Q8N5Q1 922 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 OR8G5Q8NG78 346 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 RNF141Q8WVD5 230 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 KIRREL1Q96J84 757 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 TMEM222Q9H0R3 208 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 TMEM100Q9NV29 134 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 GLS2Q9UI32 602 aa11.89□□□□□ -0.51
LDB3-204ENST00000372066 ITPR3Q14573 2671 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 A6NNC1 897 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 SH2D1BO14796 132 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 TNFSF13O75888 250 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 CGAP01215 116 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 SCTP09683 121 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 HKR1P10072 659 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 GNRHRP30968 328 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 PSG7Q13046 419 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 ZNF154Q13106 437 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 TSC22D1Q15714 1073 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 GPR157Q5UAW9 335 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 UQCC3Q6UW78 93 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 WDR86Q86TI4 376 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 RELL2Q8NC24 303 aaPredicted RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 KLF14Q8TD94 323 aaPredicted RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 FAM222BQ8WU58 562 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 RNASE6Q93091 150 aaKnown RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 TMEM56Q96MV1 263 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 BARX1Q9HBU1 254 aaPredicted RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 PURGQ9UJV8 347 aaKnown RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 TMEM56-RWDD3S4R434 201 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 A0A1W2PR80 420 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 RAB19A4D1S5 217 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 OR5H1A6NKK0 313 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 BET1O15155 118 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 RHBDL1O75783 438 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 ZNF250P15622 560 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 CEACAM8P31997 349 aaPredicted RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 ASCL1P50553 236 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 HERPUD1Q15011 391 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 ZNF718Q3SXZ3 478 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms