RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 MRPL14Q6P1L8 145 aaKnown RBP12.76□□□□□ -0.37
NDC1-201ENST00000371429 ABHD14AQ9BUJ0 271 aa12.76□□□□□ -0.37
NDC1-201ENST00000371429 RSRP1Q9BUV0 290 aa12.76□□□□□ -0.37
NDC1-201ENST00000371429 MAP1LC3B2A6NCE7 125 aa12.76□□□□□ -0.37
NDC1-201ENST00000371429 TSTD3H0UI37 97 aa12.76□□□□□ -0.37
NDC1-201ENST00000371429 CDC34P49427 236 aaPredicted RBP12.76□□□□□ -0.37
NDC1-201ENST00000371429 Q8WTZ3 238 aa12.76□□□□□ -0.37
NDC1-201ENST00000371429 MAP1LC3BQ9GZQ8 125 aa12.76□□□□□ -0.37
NDC1-201ENST00000371429 COL6A6A6NMZ7 2263 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 C9orf172C9J069 976 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 GAPDHP04406 335 aaKnown RBP12.75□□□□□ -0.37
NDC1-201ENST00000371429 COX5BP10606 129 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 KIAA0141Q14154 515 aaPredicted RBP12.75□□□□□ -0.37
NDC1-201ENST00000371429 WDR61Q9GZS3 305 aaKnown RBP12.75□□□□□ -0.37
NDC1-201ENST00000371429 IGKV1D-42A0A075B6H8 117 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 SLC31A2O15432 143 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 IGF2P01344 180 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 EFNB2P52799 333 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 DUSP18Q8NEJ0 188 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 GP6Q9HCN6 339 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 PRR13Q9NZ81 148 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 CHST1O43916 411 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 FABP9Q0Z7S8 132 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 IL24Q13007 206 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 G6PCP35575 357 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 OR8I2Q8N0Y5 310 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 ZNRF4Q8WWF5 429 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 SNX22Q96L94 193 aa12.75□□□□□ -0.37
NDC1-201ENST00000371429 ZNF107Q9UII5 783 aaPredicted RBP12.75□□□□□ -0.37
NDC1-201ENST00000371429 SIRT4Q9Y6E7 314 aaPredicted RBP12.75□□□□□ -0.37
NDC1-201ENST00000371429 A0A1W2PPQ1 181 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 SMPD2O60906 423 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 NTF3P20783 257 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 FAM27E3Q08E93 113 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 OR10G4Q8NGN3 311 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 OR10G9Q8NGN4 311 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 OR10G7Q8NGN6 311 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 DYNLRB2Q8TF09 96 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 NKX6-2Q9C056 277 aaPredicted RBP12.74□□□□□ -0.37
NDC1-201ENST00000371429 G3V3Q6 166 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 OR2H2O95918 312 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 MRPL22Q9NWU5 206 aaKnown RBP12.74□□□□□ -0.37
NDC1-201ENST00000371429 CD59P13987 128 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 GFRA1P56159 465 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 PTX4Q96A99 478 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 CLCF1Q9UBD9 225 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 NAGKQ9UJ70 344 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 B9A039 149 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 HBZP02008 142 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 INHBBP09529 407 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 PDLIM4P50479 330 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 UBE2L3P68036 154 aaKnown RBP12.74□□□□□ -0.37
NDC1-201ENST00000371429 MIDNQ504T8 468 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 HOGA1Q86XE5 327 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 GCSAMQ8N6F7 178 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 OR5M8Q8NGP6 311 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 MARVELD1Q9BSK0 173 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
NDC1-201ENST00000371429 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 TIMM23BQ5SRD1 257 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 CCL19Q99731 98 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 WNT5BQ9H1J7 359 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 RHOFQ9HBH0 211 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 SEC14L6B5MCN3 397 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 J3QR06 171 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 CYB5R3P00387 301 aaPredicted RBP12.73□□□□□ -0.37
NDC1-201ENST00000371429 SNAI3Q3KNW1 292 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 VWA1Q6PCB0 445 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 RNF2Q99496 336 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 ASCL3Q9NQ33 180 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 PIKFYVEQ9Y2I7 2098 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 FSTP19883 344 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 PRDM14Q9GZV8 571 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 IGHV3-72A0A0B4J1Y9 119 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 F5H697 171 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 ICMTO60725 284 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 CD1AP06126 327 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 UMODP07911 640 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 FAM57AQ8TBR7 257 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 MIOXQ9UGB7 285 aa12.73□□□□□ -0.37
NDC1-201ENST00000371429 FCGR3AP08637 254 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 SLC6A1P30531 599 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 SEZ6L2Q6UXD5 910 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 PKIBQ9C010 78 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 IGHV1-69-2A0A0G2JMI3 117 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 ADRB1P08588 477 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 MC5RP33032 325 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 CSRP3P50461 194 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 SUCLG1P53597 346 aaKnown RBP12.72□□□□□ -0.37
NDC1-201ENST00000371429 TMEM33P57088 247 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 ZFP36L1Q07352 338 aaKnown RBP12.72□□□□□ -0.37
NDC1-201ENST00000371429 RABAC1Q9UI14 185 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 A0A1W2PP11 408 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 ARF6P62330 175 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 PAFAH1B2P68402 229 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 COMMD1Q8N668 190 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 EFEMP2O95967 443 aa12.72□□□□□ -0.37
NDC1-201ENST00000371429 PSG2P11465 335 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms