RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 SPIN3Q5JUX0 258 aa8.58□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF429Q86V71 674 aa8.58□□□□□ -1.04
PRPF38B-203ENST00000370025 NANOS1Q8WY41 292 aaKnown RBP8.58□□□□□ -1.04
PRPF38B-203ENST00000370025 AQP3Q92482 292 aa8.58□□□□□ -1.04
PRPF38B-203ENST00000370025 METTL9Q9H1A3 318 aa8.58□□□□□ -1.04
PRPF38B-203ENST00000370025 SOCS1O15524 211 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 SCGB1D1O95968 90 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 GZMBP10144 247 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 CD33P20138 364 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 FGF7P21781 194 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 RBMXP38159 391 aaKnown RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 ALDH3B1P43353 468 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 SUPT4H1P63272 117 aaKnown RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 SRSF4Q08170 494 aaKnown RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 IGFL3Q6UXB1 125 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 BTNL3Q6UXE8 466 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 ZDHHC22Q8N966 263 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 FAM210BQ96KR6 192 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 LPAR5Q9H1C0 372 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF107Q9UII5 783 aaPredicted RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 C5orf49A4QMS7 147 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 SS18L1O75177 396 aaPredicted RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 NRASP01111 189 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 MTCP1P56278 107 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 FAM3AP98173 230 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF92Q03936 586 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 CHRFAM7AQ494W8 412 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 MRPL41Q8IXM3 137 aaKnown RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 OR1K1Q8NGR3 316 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 OR10J5Q8NHC4 309 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 C1orf147Q96MC9 270 aaPredicted RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 NDUFAF3Q9BU61 184 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 CLCF1Q9UBD9 225 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 hCG_38984A0A1B0GV85 526 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 MARCH11A6NNE9 402 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF850A8MQ14 1090 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 SFT2D2O95562 160 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 MELTFP08582 738 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 S100A7P31151 101 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 MALLQ13021 153 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 OR5H2Q8NGV7 314 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 MRPL24Q96A35 216 aaKnown RBP8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 SLC25A31Q9H0C2 315 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 WFDC1Q9HC57 220 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 SLC7A11Q9UPY5 501 aa8.57□□□□□ -1.04
PRPF38B-203ENST00000370025 MED12LQ86YW9 2145 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TNRC6AQ8NDV7 1962 aaKnown RBP8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 ANGPTL7O43827 346 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 HLA-GP17693 338 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 FUT3P21217 361 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TGFBR3Q03167 851 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TMEM268Q5VZI3 342 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 COLCA1Q6ZS62 124 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TMEM217Q8N7C4 229 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 OR5T1Q8NG75 326 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 APOBEC3DQ96AK3 386 aaPredicted RBP8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 BORCS8Q96FH0 119 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TMEM208Q9BTX3 173 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TRBV6-7A0A0A0MS04 114 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF816-ZNF321PA0A0X1KG74 233 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TCF21O43680 179 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 GSTP1P09211 210 aaKnown RBP8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 PMELP40967 661 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TFPI2P48307 235 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 PHLDA2Q53GA4 152 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 AADACL3Q5VUY0 350 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 LHFPL2Q6ZUX7 228 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TMEM37Q8WXS4 190 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 BCL2L2Q92843 193 aaPredicted RBP8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 SPSB4Q96A44 273 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 TECTBQ96PL2 329 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 RBM7Q9Y580 266 aaKnown RBP8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 IL18BPO95998 194 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 OR5H8P0DN80 308 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 BLVRBP30043 206 aaPredicted RBP8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 RAB11AP62491 216 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 FOXC1Q12948 553 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 OR8B8Q15620 311 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 ABCA11PQ4W5N1 156 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 RTL6Q6ICC9 239 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 FAM214BQ7L5A3 538 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 FAM185AQ8N0U4 392 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 PRR18Q8N4B5 295 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 SLC35G3Q8N808 338 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 PIGCQ92535 297 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 MALSU1Q96EH3 234 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 MEMO1Q9Y316 297 aa8.56□□□□□ -1.04
PRPF38B-203ENST00000370025 HIKESHIQ53FT3 197 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 TMEM42Q69YG0 159 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 C1QL2Q7Z5L3 287 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 GCNT2Q8N0V5 402 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 NIPSNAP3BQ9BS92 247 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 RAB18Q9NP72 206 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 PLSCR2Q9NRY7 297 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 ZFP92A6NM28 416 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF705FA8MVS1 300 aaPredicted RBP8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 AHRRA9YTQ3 701 aa8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF705DP0CH99 300 aaPredicted RBP8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 ZNF705BP0CI00 300 aaPredicted RBP8.55□□□□□ -1.04
PRPF38B-203ENST00000370025 CCL2P13500 99 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms