RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 F2RL2O00254 374 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 TPPPO94811 219 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 FAM157CP0CG43 387 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 OMGP23515 440 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 DTYMKP23919 212 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 GNG2P59768 71 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 HMGN3Q15651 99 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 RFESDQ8TAC1 157 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 SETD6Q8TBK2 473 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 AUNIPQ9H7T9 357 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 SETD2Q9BYW2 2564 aaPredicted RBP12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 MMP23AO75900 390 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 HBZP02008 142 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 FCGR3AP08637 254 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 EPHA1P21709 976 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 CD34P28906 385 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 KIR2DS4P43632 304 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 TAS2R20P59543 309 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 KIR2DS1Q14954 304 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 MIDNQ504T8 468 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 FOXB2Q5VYV0 432 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 HCP5Q6MZN7 132 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 Q6ZS49 121 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 C15orf40Q8WUR7 153 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 GALMQ96C23 342 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 CLEC7AQ9BXN2 247 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 C6orf62Q9GZU0 229 aaPredicted RBP12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 MS4A7Q9GZW8 240 aaPredicted RBP12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 MMP27Q9H306 513 aa12.69□□□□□ -0.38
PRPF38B-202ENST00000370022 SVEP1Q4LDE5 3571 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 IGHV2-26A0A0B4J1V2 119 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 SDCBPO00560 298 aaPredicted RBP12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 CTDSP2O14595 271 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 COX7A1P24310 79 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 DLX1P56177 255 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 HLA-DRB3P79483 266 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 HTD2P86397 168 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 KLRD1Q13241 179 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 Q3ZCU0 254 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 Q6ZPA2 131 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 ABHD12Q8N2K0 398 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 PNKDQ8N490 385 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 PRR18Q8N4B5 295 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 SUCNR1Q9BXA5 334 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 RABL2AQ9UBK7 228 aaPredicted RBP12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 EXTL2Q9UBQ6 330 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 RABL2BQ9UNT1 228 aa12.68□□□□□ -0.38
PRPF38B-202ENST00000370022 IGHV3OR16-10A0A075B7F0 116 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 TRDCB7Z8K6 153 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 NPFFO15130 113 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 NFYBP25208 207 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 GDNFP39905 211 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 CBX5P45973 191 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 STEAP3Q658P3 488 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 ZNF626Q68DY1 528 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 BAIAP2L2Q6UXY1 529 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 LAX1Q8IWV1 398 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 PDZD9Q8IXQ8 264 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 IZUMO1Q8IYV9 350 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 ZNF596Q8TC21 504 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 MIXL1Q9H2W2 232 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 GFOD1Q9NXC2 390 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 JPT1Q9UK76 154 aa12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 ELF5Q9UKW6 265 aaPredicted RBP12.67□□□□□ -0.38
PRPF38B-202ENST00000370022 ODF3BA8MYP8 253 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 DIRAS3O95661 229 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 HLA-DQB1P01920 261 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 PRRX1P54821 245 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 LOXL3P58215 753 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 PRB3Q04118 309 aaPredicted RBP12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 BRD3OSQ6XYD6 125 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 C8orf31Q8N9H6 132 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 BEND2Q8NDZ0 799 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 OR4A4PQ8NGN8 299 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 OR9G1Q8NH87 305 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 OR1L1Q8NH94 360 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 NUDCD2Q8WVJ2 157 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 CREB3L1Q96BA8 519 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 ZNF69Q9UC07 566 aa12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 TBL2Q9Y4P3 447 aaKnown RBP12.66□□□□□ -0.38
PRPF38B-202ENST00000370022 TOR1AO14656 332 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 SSX5O60225 188 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 RGS11O94810 467 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 ARG1P05089 322 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 PRSS3P35030 304 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 SAA4P35542 130 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 LGALS4P56470 323 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 LTC4SQ16873 150 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 RUSC1-AS1Q66K80 236 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 PIP4P2Q8N4L2 257 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 OCSTAMPQ9BR26 566 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 OR2S2Q9NQN1 319 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 GNG12Q9UBI6 72 aa12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 MRPS7Q9Y2R9 242 aaKnown RBP12.65□□□□□ -0.38
PRPF38B-202ENST00000370022 FABP7O15540 132 aa12.64□□□□□ -0.39
PRPF38B-202ENST00000370022 IGLV1-47P01700 117 aa12.64□□□□□ -0.39
PRPF38B-202ENST00000370022 S100A5P33763 92 aa12.64□□□□□ -0.39
PRPF38B-202ENST00000370022 LY6G6FQ5SQ64 297 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms