RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CTSDP07339 412 aaPredicted RBP11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 CD34P28906 385 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 GNMTQ14749 295 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 SURF2Q15527 256 aaPredicted RBP11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 NOXA1Q86UR1 476 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 H1FOOQ8IZA3 346 aaPredicted RBP11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 OR4A4PQ8NGN8 299 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 DIRC2Q96SL1 478 aa11.75□□□□□ -0.53
HMGCS2-201ENST00000369406 LY6HO94772 140 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 SFT2D2O95562 160 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 SOD3P08294 240 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 IGFBP2P18065 325 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 AGAP20933 346 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 GNRHRP30968 328 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 GLP1RP43220 463 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 FAHD2BQ6P2I3 314 aaPredicted RBP11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 CCL17Q92583 94 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 FAHD2AQ96GK7 314 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 CELSR2Q9HCU4 2923 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 FAM208BQ5VWN6 2430 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 OOEPA6NGQ2 149 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 K7N7A8 449 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 OR2A4O95047 310 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 C1QBP02746 253 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 TNFRSF1AP19438 455 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 GZMKP49863 264 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 PIGPP57054 158 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 KCTD9Q7L273 389 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 GRPEL2Q8TAA5 225 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 ERGIC1Q969X5 290 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 OR2A7Q96R45 310 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 RSRP1Q9BUV0 290 aa11.74□□□□□ -0.53
HMGCS2-201ENST00000369406 MAP1AP78559 2803 aaPredicted RBP11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 FAM172BPA6NC97 362 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 CRYM-AS1A6NIL9 109 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 MPTX1A8MV57 137 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 SLC22A5O76082 557 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 DUS4LO95620 317 aaKnown RBP11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 TK1P04183 234 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 TAS2R31P59538 309 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 SP6Q3SY56 376 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 ZNF818PQ6ZRF7 136 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 MOB1BQ7L9L4 216 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 TCF23Q7RTU1 214 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 FAM219AQ8IW50 185 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 OR52L2PQ8NGH6 319 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 SUN5Q8TC36 379 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 SECTM1Q8WVN6 248 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 SDSLQ96GA7 329 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 SLC2A9Q9NRM0 540 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 TMEM106BQ9NUM4 274 aa11.73□□□□□ -0.53
HMGCS2-201ENST00000369406 C15orf65H3BRN8 121 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 ADAP1O75689 374 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 IGLV2-14P01704 120 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 HBZP02008 142 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 HERV-K104P61576 105 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 C11orf71Q6IPW1 123 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 LYPD2Q6UXB3 125 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 ZNF788Q6ZQV5 615 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 OR2T35Q8NGX2 323 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 SNX22Q96L94 193 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 VRK1Q99986 396 aaPredicted RBP11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 CCL28Q9NRJ3 127 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 C14orf166Q9Y224 244 aaKnown RBP11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 COL8A2P25067 703 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 PAX5Q02548 391 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 OPN4Q9UHM6 478 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 PCDHB10Q9UN67 800 aa11.72□□□□□ -0.53
HMGCS2-201ENST00000369406 IGHV3-43A0A0B4J1X8 118 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 ODAMA1E959 279 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 VSTM5A8MXK1 200 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 HSD17B6O14756 317 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 CRYZL1O95825 349 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 IGHV3-43DP0DP04 118 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 UCP3P55916 312 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 SRSF1Q07955 248 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 OR5M8Q8NGP6 311 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 OR10J5Q8NHC4 309 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 C5orf30Q96GV9 206 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 EGLN1Q9GZT9 426 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 MS4A5Q9H3V2 200 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 CSMD2Q7Z408 3487 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 ARHGAP32A7KAX9 2087 aa11.71□□□□□ -0.53
HMGCS2-201ENST00000369406 NPIPB11E5RHQ5 1161 aa11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 TNFRSF13BO14836 293 aaPredicted RBP11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 HEXAP06865 529 aa11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 DANCRP0C864 163 aa11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 FBN2P35556 2912 aa11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 RTN4IP1Q8WWV3 396 aaPredicted RBP11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 SEC22AQ96IW7 307 aa11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 SCGB3A2Q96PL1 93 aa11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 RDH8Q9NYR8 311 aa11.71□□□□□ -0.54
HMGCS2-201ENST00000369406 OR2W1Q9Y3N9 320 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms