RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 SPIN3Q5JUX0 258 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 GLCCI1Q86VQ1 547 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 HOGA1Q86XE5 327 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 BATF2Q8N1L9 274 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 ZNF488Q96MN9 340 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 SULT4A1Q9BR01 284 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 FAAP24Q9BTP7 215 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 CHST6Q9GZX3 395 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 TUBA4BQ9H853 241 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 ZNF581Q9P0T4 197 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 IL36RNQ9UBH0 155 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 IL19Q9UHD0 177 aa10.19□□□□□ -0.78
USF1-203ENST00000368021 HRNRQ86YZ3 2850 aaPredicted RBP10.18□□□□□ -0.78
USF1-203ENST00000368021 POLQO75417 2590 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 ABCA4P78363 2273 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 A6NLC8 198 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 NXPH2O95156 264 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 CRYBA1P05813 215 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 MECP2P51608 486 aaKnown RBP10.18□□□□□ -0.78
USF1-203ENST00000368021 BPIFB3P59826 476 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 ATPAF1Q5TC12 328 aaPredicted RBP10.18□□□□□ -0.78
USF1-203ENST00000368021 ATRAIDQ6UW56 229 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 SLC16A13Q7RTY0 426 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 ZNF295-AS1Q8N0V1 137 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 OR4S1Q8NGB4 309 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 MEGF10Q96KG7 1140 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 OR2V2Q96R30 315 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 DIRC2Q96SL1 478 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 AK3Q9UIJ7 227 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 RNF115Q9Y4L5 304 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 TEX15Q9BXT5 2789 aa10.18□□□□□ -0.78
USF1-203ENST00000368021 CHD3Q12873 2000 aaKnown RBP10.17□□□□□ -0.78
USF1-203ENST00000368021 UBE2QL1A1L167 161 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 RFPL4AA6NLU0 287 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 RFPL4AL1F8VTS6 287 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 H7C1Q1 480 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 GPR37O15354 613 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 CREBL2O60519 120 aaPredicted RBP10.17□□□□□ -0.78
USF1-203ENST00000368021 MT-ND4LP03901 98 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 CXCL3P19876 107 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 TNFSF4P23510 183 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 SERPINF1P36955 418 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 PCP4P48539 62 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 ZNF345Q14585 488 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 RBMS2Q15434 407 aaKnown RBP10.17□□□□□ -0.78
USF1-203ENST00000368021 RNASE10Q5GAN6 216 aaKnown RBP10.17□□□□□ -0.78
USF1-203ENST00000368021 PRAMEF6Q5VXH4 476 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 SFRP4Q6FHJ7 346 aaPredicted RBP10.17□□□□□ -0.78
USF1-203ENST00000368021 FAAP20Q6NZ36 180 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 ERGIC1Q969X5 290 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 CMSS1Q9BQ75 279 aaKnown RBP10.17□□□□□ -0.78
USF1-203ENST00000368021 SLC2A8Q9NY64 477 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 NAV2Q8IVL1 2488 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 AKAP6Q13023 2319 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 SPG11Q96JI7 2443 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 IGHV3-64DA0A0J9YX35 117 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 E7EQL1 145 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 LGALS8O00214 317 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 SPRY3O43610 288 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 NDUFB6O95139 128 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 IGHV1-46P01743 117 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 APOBEC3AP31941 199 aaPredicted RBP10.17□□□□□ -0.78
USF1-203ENST00000368021 HRH1P35367 487 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 TAS2R46P59540 309 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 PKIAP61925 76 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 EFNB3Q15768 340 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 VAX1Q5SQQ9 334 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 OR52W1Q6IF63 320 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 Q6P435 159 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 IL34Q6ZMJ4 242 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 ZNF826PQ6ZT77 177 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 BPIFCQ8NFQ6 507 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 OR51S1Q8NGJ8 323 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 OR4K15Q8NH41 348 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 EDARADDQ8WWZ3 215 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 MALSU1Q96EH3 234 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 CYYR1Q96J86 154 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 PRRT1Q99946 306 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 TMEM204Q9BSN7 226 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 C20orf85Q9H1P6 137 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 FN3KRPQ9HA64 309 aa10.17□□□□□ -0.78
USF1-203ENST00000368021 MAP1AP78559 2803 aaPredicted RBP10.16□□□□□ -0.78
USF1-203ENST00000368021 DEFB108AA8MXU0 73 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 SIAH2O43255 324 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 AMY2AP04746 511 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 CD55P08174 381 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 FCGR3AP08637 254 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 ZNF735P0CB33 412 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 ANXA7P20073 488 aaKnown RBP10.16□□□□□ -0.78
USF1-203ENST00000368021 KCNJ3P48549 501 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 SNU13P55769 128 aaKnown RBP10.16□□□□□ -0.78
USF1-203ENST00000368021 SNRPEP62304 92 aaKnown RBP10.16□□□□□ -0.78
USF1-203ENST00000368021 TLE4Q04727 773 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 RBM39Q14498 530 aaKnown RBP10.16□□□□□ -0.78
USF1-203ENST00000368021 PDCD1Q15116 288 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 SRSF7Q16629 238 aaKnown RBP eCLIP10.16□□□□□ -0.78
USF1-203ENST00000368021 SMIM21Q3B7S5 101 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 ACP7Q6ZNF0 438 aa10.16□□□□□ -0.78
USF1-203ENST00000368021 MRPL52Q86TS9 123 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms