RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 STUB1Q9UNE7 303 aa11.8□□□□□ -0.52
SF3B5-201ENST00000367569 PSG11Q9UQ72 335 aa11.8□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A10PA6NDY2 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A22PA8MWA6 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 NPIPB11E5RHQ5 1161 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 HBZP02008 142 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 CLEC2LP0C7M8 214 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 RAB3BP20337 219 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 CD34P28906 385 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 TGFBR1P36897 503 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 REG1BP48304 166 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 VEGFCP49767 419 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 PAX5Q02548 391 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 MXD1Q05195 221 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 HABP2Q14520 560 aaPredicted RBP11.79□□□□□ -0.52
SF3B5-201ENST00000367569 TPTE2P1Q5T6R2 138 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 MINOS1Q5TGZ0 78 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 OR9G1Q8NH87 305 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 LINC01006Q8NI28 216 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 ZNF596Q8TC21 504 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 TOMM40LQ969M1 308 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 TM2D1Q9BX74 207 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 MMP28Q9H239 520 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 CHMP1AQ9HD42 196 aaPredicted RBP11.79□□□□□ -0.52
SF3B5-201ENST00000367569 STEAP1Q9UHE8 339 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 TCF19Q9Y242 345 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 RNF114Q9Y508 228 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
SF3B5-201ENST00000367569 A0A075B6Q4 140 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 SH2D7A6NKC9 451 aaPredicted RBP11.78□□□□□ -0.52
SF3B5-201ENST00000367569 BUB1B-PAK6H3BSN5 160 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 J3QR06 171 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 PDCD5O14737 125 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 CD37P11049 281 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 RPL15P61313 204 aaKnown RBP11.78□□□□□ -0.52
SF3B5-201ENST00000367569 C2orf76Q3KRA6 126 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 MOGAT2Q3SYC2 334 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 OR2W3Q7Z3T1 314 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 TAF9BQ9HBM6 251 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 DPM3Q9P2X0 92 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 AK3Q9UIJ7 227 aa11.78□□□□□ -0.52
SF3B5-201ENST00000367569 A0A087X0M5 115 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 TRAV1-2A0A0B4J238 106 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 A0A1B0GX30 115 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 A6NDX4 124 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 IFITM5A6NNB3 132 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 LEUTXA8MZ59 168 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 RRP9O43818 475 aaKnown RBP11.77□□□□□ -0.53
SF3B5-201ENST00000367569 CD36P16671 472 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 PROK1P58294 105 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 TMEM95Q3KNT9 176 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 C6orf183Q5T699 404 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 OR52L2PQ8NGH6 319 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 OR10X1Q8NGY0 326 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 ARHGAP5-AS1Q96IT6 56 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 URM1Q9BTM9 101 aaKnown RBP11.77□□□□□ -0.53
SF3B5-201ENST00000367569 NCOR1P1Q9H4R4 102 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 LIN7BQ9HAP6 207 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 PLEKHJ1Q9NW61 149 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 GFOD1Q9NXC2 390 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 GNG12Q9UBI6 72 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 SSR3Q9UNL2 185 aa11.77□□□□□ -0.53
SF3B5-201ENST00000367569 IGHV3-72A0A0B4J1Y9 119 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 VGLL3A8MV65 326 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 LDLRAD4O15165 306 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 SPINT2O43291 252 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 TNFAIP8O95379 198 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 PPP1CCP36873 323 aaKnown RBP11.76□□□□□ -0.53
SF3B5-201ENST00000367569 PRRX1P54821 245 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 LOXL3P58215 753 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 LSM3P62310 102 aaKnown RBP11.76□□□□□ -0.53
SF3B5-201ENST00000367569 GAPTQ8N292 157 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 OR4C13Q8NGP0 309 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 OR56B4Q8NH76 319 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 RPEQ96AT9 228 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 CENPOQ9BU64 300 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 PECRQ9BY49 303 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
SF3B5-201ENST00000367569 A0A1W2PPI3 338 aa11.75□□□□□ -0.53
SF3B5-201ENST00000367569 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
SF3B5-201ENST00000367569 LY6LH3BQJ8 138 aa11.75□□□□□ -0.53
SF3B5-201ENST00000367569 M0QZ24 198 aa11.75□□□□□ -0.53
SF3B5-201ENST00000367569 HSD17B6O14756 317 aa11.75□□□□□ -0.53
SF3B5-201ENST00000367569 TIMM23O14925 209 aa11.75□□□□□ -0.53
SF3B5-201ENST00000367569 ORC5O43913 435 aa11.75□□□□□ -0.53
SF3B5-201ENST00000367569 SNRPBP14678 240 aaKnown RBP11.75□□□□□ -0.53
SF3B5-201ENST00000367569 SDC2P34741 201 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms