RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 ZNF799Q96GE5 643 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 NMNAT3Q96T66 252 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 C2orf88Q9BSF0 95 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 HSPB7Q9UBY9 170 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 PRRC2BQ5JSZ5 2229 aaKnown RBP7.62□□□□□ -1.19
SYNE1-206ENST00000367253 DUXBA0A1W2PPF3 345 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 GPX5O75715 221 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 GPANK1O95872 356 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 SLC25A16P16260 332 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 ACP1P24666 158 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 SYPL1Q16563 259 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 TGIF2LYQ8IUE0 185 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM105Q8N8V8 129 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 OR4C3Q8NH37 302 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 OR1L3Q8NH93 324 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 MS4A8Q9BY19 250 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 PRSS22Q9GZN4 317 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 AKIP1Q9NQ31 210 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 SPANXA1Q9NS26 97 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 CLEC2DQ9UHP7 191 aa7.62□□□□□ -1.19
SYNE1-206ENST00000367253 WNT9BO14905 357 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 KLF4O43474 513 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 FCMRO60667 390 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 CRISP2P16562 243 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 FGF8P55075 233 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 RASL11AQ6T310 242 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 NKAIN4Q8IVV8 208 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 SLCO4A1Q96BD0 722 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 MMP25Q9NPA2 562 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 SLC22A13Q9Y226 551 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 SPCS1Q9Y6A9 102 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 FAM72CH0Y354 149 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 CST4P01036 141 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 KIR3DL2P43630 455 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 C5orf47Q569G3 176 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 MRPL2Q5T653 305 aaKnown RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 FAM72AQ5TYM5 149 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 FAM72DQ6L9T8 149 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 DRAM2Q6UX65 266 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 OR2W3Q7Z3T1 314 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 FAM72BQ86X60 149 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 STPG2Q8N412 459 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 NUBPLQ8TB37 319 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 PELI1Q96FA3 418 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 TMEM147Q9BVK8 224 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 Q9N2K0 584 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 PEMTQ9UBM1 199 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 HEATR1Q9H583 2144 aaKnown RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 DHRS7CA6NNS2 312 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 SLC6A1P30531 599 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 KIR2DS2P43631 304 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 HLXQ14774 488 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 C11orf87Q6NUJ2 197 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 PCSK4Q6UW60 755 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 PLPPR2Q96GM1 343 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 KIAA1217Q5T5P2 1943 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 ANKRD20A5PA0PJZ0 165 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 HIST1H1BP16401 226 aaKnown RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 RPL27P61353 136 aaKnown RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 ISL1P61371 349 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 PNRC1Q12796 327 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 EIF4EBP2Q13542 120 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-206ENST00000367253 ASPHD2Q6ICH7 369 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 TBPL2Q6SJ96 375 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 ALKAL1Q6UXT8 129 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 DTX2Q86UW9 622 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 AP5S1Q9NUS5 200 aa7.61□□□□□ -1.19
SYNE1-206ENST00000367253 DOCK3Q8IZD9 2030 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 IL5P05113 134 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 SEC11BP0C7V7 166 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 STPG3Q8N7X2 389 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 OR4F17Q8NGA8 305 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 EEF1AKMT3Q96AZ1 226 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 NEIL1Q96FI4 390 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 PDLIM5Q96HC4 596 aaKnown RBP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 FSCN3Q9NQT6 498 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 SBF1O95248 1867 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 NKX2-2O95096 273 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 ZNF114Q8NC26 417 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 OR10D3Q8NH80 312 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 RTN4IP1Q8WWV3 396 aaPredicted RBP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 FLYWCH2Q96CP2 140 aaKnown RBP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 MRAP2Q96G30 205 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 UQCC1Q9NVA1 299 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 PSENENQ9NZ42 101 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 TBL2Q9Y4P3 447 aaKnown RBP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 LIMS3P0CW19 117 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 LIMS4P0CW20 117 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 GLI4P10075 376 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 HIST1H1EP10412 219 aaKnown RBP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 SRSF9Q13242 221 aaKnown RBP eCLIP7.6□□□□□ -1.19
SYNE1-206ENST00000367253 C9orf153Q5TBE3 101 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 C1orf122Q6ZSJ8 110 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 CALHM1Q8IU99 346 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 WDTC1Q8N5D0 677 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 OR4C16Q8NGL9 310 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 OR1L1Q8NH94 360 aa7.6□□□□□ -1.19
SYNE1-206ENST00000367253 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms