RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 FBXL3Q9UKT7 428 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 ROS1P08922 2347 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 MYH11P35749 1972 aa0.87□□□□□ -2.27
RNU4-28P-201ENST00000364739 KIAA2026Q5HYC2 2103 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 MYO15BQ96JP2 1530 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 J3QQQ9 107 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 SC5DO75845 299 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 TSPOP30536 169 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 INPP1P49441 399 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 RPL26P61254 145 aaKnown RBP0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 BAXQ07812 192 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 DGAT2L6Q6ZPD8 337 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 NAA38Q9BRA0 125 aaKnown RBP0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 TIMM21Q9BVV7 248 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 PECRQ9BY49 303 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 TM6SF2Q9BZW4 377 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 DDX18Q9NVP1 670 aaKnown RBP0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 PSME2Q9UL46 239 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 RPL26L1Q9UNX3 145 aaKnown RBP0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 ZFHX2Q9C0A1 2572 aaPredicted RBP0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 FREM1Q5H8C1 2179 aa0.86□□□□□ -2.27
RNU4-28P-201ENST00000364739 KDM5BQ9UGL1 1544 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 PCDH15Q96QU1 1955 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 I3L4J1 428 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 CASC3O15234 703 aaKnown RBP0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 MAGEA12P43365 314 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 SKP2Q13309 424 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 TIMM23BQ5SRD1 257 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 COA5Q86WW8 74 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 SPICQ8N5J4 248 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 TRIML2Q8N7C3 387 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR6K2Q8NGY2 324 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 C16orf78Q8WTQ4 265 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 GLT1D1Q96MS3 346 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 RETNLBQ9BQ08 111 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 EBPLQ9BY08 206 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 GAL3ST2Q9H3Q3 398 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 SMDT1Q9H4I9 107 aa0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 TXNL4BQ9NX01 149 aaKnown RBP0.85□□□□□ -2.27
RNU4-28P-201ENST00000364739 MICAL3Q7RTP6 2002 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 PLCH2O75038 1416 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 C8orf87E5RJ46 101 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 H0YIV9 168 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 KDELR3O43731 214 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 GIMD1P0DJR0 217 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 PDGFRLQ15198 375 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 FAHD1Q6P587 224 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 C2orf91Q6ZV80 131 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 OR9I1Q8NGQ6 314 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 C10orf105Q8TEF2 133 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 NAP1L5Q96NT1 182 aaPredicted RBP0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 CIB1Q99828 191 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 UPK3BQ9BT76 320 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 SYT4Q9H2B2 425 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 HAUS4Q9H6D7 363 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 RPRD1BQ9NQG5 326 aaKnown RBP0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 USH1CQ9Y6N9 552 aa0.84□□□□□ -2.27
RNU4-28P-201ENST00000364739 MYOFQ9NZM1 2061 aa0.84□□□□□ -2.28
RNU4-28P-201ENST00000364739 TRAV8-2A0A0B4J237 113 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 C9J4A7 227 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 DENRO43583 198 aaKnown RBP0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 LY6HO94772 140 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 DEKP35659 375 aaKnown RBP0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 DSTNP60981 165 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 ZBTB6Q15916 424 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 HBMQ6B0K9 141 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 EBLN2Q6P2I7 272 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 AGTRAPQ6RW13 159 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 FAM184AQ8NB25 1140 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 OR11H1Q8NG94 326 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 OR4K17Q8NGC6 315 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 OR10A6Q8NH74 314 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 TAS2R13Q9NYV9 303 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 DOK5Q9P104 306 aa0.83□□□□□ -2.28
RNU4-28P-201ENST00000364739 GOLGA6L7A0A1B0GV03 622 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 A8MUN3 132 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 CD200P41217 278 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 RANBP1P43487 201 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 DYNLL1P63167 89 aaKnown RBP0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 MBOAT7Q96N66 472 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 PRSS27Q9BQR3 290 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 ZNF426Q9BUY5 554 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 NDUFB11Q9NX14 153 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 STMN3Q9NZ72 180 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 PRO2289Q9P1D8 64 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 PTPRBP23467 1997 aa0.82□□□□□ -2.28
RNU4-28P-201ENST00000364739 KIF27Q86VH2 1401 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 DSCAMO60469 2012 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 B4DEV8 164 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 PSMA1P25786 263 aaKnown RBP0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 UAP1Q16222 522 aaPredicted RBP0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 MRPL51Q4U2R6 128 aaKnown RBP0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 LAMTOR1Q6IAA8 161 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 FAM183BPQ6ZVS7 135 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 PID1Q7Z2X4 250 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 SLC35F6Q8N357 371 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 C10orf126Q8N4M7 172 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 GTF2H4Q92759 462 aa0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 MRPS24Q96EL2 167 aaKnown RBP0.81□□□□□ -2.28
RNU4-28P-201ENST00000364739 PGLYRP3Q96LB9 341 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms