RNA–Protein interactions for RNA: ENST00000363399.1

RNU6-838P-201, Transcript of RNA, U6 small nuclear 838, pseudogene, humanhuman

BASIC

Gene RNU6-838P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-838P-201ENST00000363399 hCG_1807616A0A1W2PRN6 198 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 C21orf140B9A014 251 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 BCKDKO14874 412 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 DENRO43583 198 aaKnown RBP-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 DHRS3O75911 302 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 SMC2O95347 1197 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 CLPSP04118 112 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 ABHD2P08910 425 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 AREGP15514 252 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 MAN1A1P33908 653 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 EMP1P54849 157 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 CAV3P56539 151 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 TPI1P60174 286 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 CEACAM21Q3KPI0 293 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 RBM48Q5RL73 367 aaKnown RBP-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 FAM27BQ5VT28 67 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 UBE2UQ5VVX9 321 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 DPY19L4Q7Z388 723 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 LINC00337Q8N6G1 96 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 DQX1Q8TE96 717 aaKnown RBP-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 TMA16Q96EY4 203 aaKnown RBP-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 CFAP36Q96G28 342 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 RMND5BQ96G75 393 aaPredicted RBP-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 BLZF1Q9H2G9 400 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 RMND5AQ9H871 391 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 PRMT8Q9NR22 394 aaPredicted RBP-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 GNG12Q9UBI6 72 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 TAGLN3Q9UI15 199 aa-3.88□□□□□ -3.03
RNU6-838P-201ENST00000363399 ZNF608Q9ULD9 1512 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 TRAV38-1A0A0B4J264 116 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 IGHV1-69P01742 117 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 LGALS1P09382 135 aaKnown RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 BGNP21810 368 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 GNA11P29992 359 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 MYCNOSP40205 109 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 TSPEAR-AS2P59090 65 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 SSTP61278 116 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 BSPH1Q075Z2 132 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 BSXQ3C1V8 233 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 NADK2Q4G0N4 442 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 TRAT1Q6PIZ9 186 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 FAM159AQ6UWV7 190 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 DRAM2Q6UX65 266 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 C12orf54Q6X4T0 127 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 CASC2Q6XLA1 102 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 APRG1Q8IVJ8 170 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 CNEP1R1Q8N9A8 125 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 RHEBL1Q8TAI7 183 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 THRSPQ92748 146 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 NRBF2Q96F24 287 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 JSRP1Q96MG2 331 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 SLF1Q9BQI6 1058 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 SLC50A1Q9BRV3 221 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 ACAT2Q9BWD1 397 aa-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 MRPL20Q9BYC9 149 aaKnown RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 MRPL13Q9BYD1 178 aaKnown RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 ILKAPQ9H0C8 392 aaPredicted RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 MRPS30Q9NP92 439 aaKnown RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 OLA1Q9NTK5 396 aaKnown RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 STRAPQ9Y3F4 350 aaKnown RBP-3.89□□□□□ -3.03
RNU6-838P-201ENST00000363399 BOD1L1Q8NFC6 3051 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 SIRPB1O00241 398 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 CLDN3O15551 220 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 CRXO43186 299 aaPredicted RBP-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 COX7A2P2O60397 106 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 OR2F2O95006 317 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 MT1GP13640 62 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 CXCR1P25024 350 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 CA5AP35218 305 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 CRATP43155 626 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 PLA2G16P53816 162 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 CDH6P55285 790 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 FAM3AP98173 230 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 GGTA1PQ4G0N0 100 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 TNFAIP8L3Q5GJ75 292 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 SLC13A5Q86YT5 568 aaPredicted RBP-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 IQCKQ8N0W5 287 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 PDIK1LQ8N165 341 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 NHLRC2Q8NBF2 726 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 OR51E1Q8TCB6 317 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 REEP6Q96HR9 211 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 PKNOX2Q96KN3 472 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 GBP5Q96PP8 586 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 CHCHD6Q9BRQ6 235 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 MRPS26Q9BYN8 205 aaKnown RBP-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 ARV1Q9H2C2 271 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 C14orf105Q9NVL8 296 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 PITPNC1Q9UKF7 332 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 GSTK1Q9Y2Q3 226 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 N6AMT1Q9Y5N5 214 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 JCADQ9P266 1359 aa-3.9□□□□□ -3.03
RNU6-838P-201ENST00000363399 SIP14410 1827 aa-3.91□□□□□ -3.03
RNU6-838P-201ENST00000363399 ADGRG4Q8IZF6 3080 aa-3.91□□□□□ -3.03
RNU6-838P-201ENST00000363399 SPAG9O60271 1321 aaKnown RBP-3.91□□□□□ -3.03
RNU6-838P-201ENST00000363399 ATG2AQ2TAZ0 1938 aa-3.91□□□□□ -3.04
RNU6-838P-201ENST00000363399 A0A1W2PNV4 684 aa-3.91□□□□□ -3.04
RNU6-838P-201ENST00000363399 LOC105371045A0A1W2PR82 267 aa-3.91□□□□□ -3.04
RNU6-838P-201ENST00000363399 TRIM64A6NGJ6 449 aa-3.91□□□□□ -3.04
RNU6-838P-201ENST00000363399 TRIM64BA6NI03 449 aa-3.91□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms