RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TRBV23-1A0A0A0MS06 115 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 DISC1C4P0D8 188 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 SCTP09683 121 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 SLC25A16P16260 332 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 GZMHP20718 246 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 SEC61A1P61619 476 aaKnown RBP17.05■□□□□ 0.32
SHISA4-201ENST00000362011 VAX1Q5SQQ9 334 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 FAAP20Q6NZ36 180 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 FAM185AQ8N0U4 392 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 OR4D10Q8NGI6 311 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 CORO2AQ92828 525 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 MDFIQ99750 246 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 RAB9BQ9NP90 201 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 C19orf12Q9NSK7 152 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 MCUBQ9NWR8 336 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 EHFQ9NZC4 300 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 UBE2J1Q9Y385 318 aaPredicted RBP17.05■□□□□ 0.32
SHISA4-201ENST00000362011 LINC00312Q9Y6C7 94 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 MALRD1Q5VYJ5 2156 aa17.05■□□□□ 0.32
SHISA4-201ENST00000362011 ZNF729A6NN14 1252 aaPredicted RBP17.04■□□□□ 0.32
SHISA4-201ENST00000362011 C12orf77C9JDV5 145 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 AMY2AP04746 511 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 IFNA6P05013 189 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 RGS21Q2M5E4 152 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 ZNF782Q6ZMW2 699 aaPredicted RBP17.04■□□□□ 0.32
SHISA4-201ENST00000362011 BTN2A1Q7KYR7 527 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 TCF23Q7RTU1 214 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 C5orf24Q7Z6I8 188 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 CIARTQ8N365 385 aaPredicted RBP17.04■□□□□ 0.32
SHISA4-201ENST00000362011 PRR18Q8N4B5 295 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 ARL11Q969Q4 196 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 OPN4Q9UHM6 478 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 CR1P17927 2039 aa17.04■□□□□ 0.32
SHISA4-201ENST00000362011 MEX3AA1L020 520 aaKnown RBP17.03■□□□□ 0.32
SHISA4-201ENST00000362011 KIAA1324LA8MWY0 1029 aaPredicted RBP17.03■□□□□ 0.32
SHISA4-201ENST00000362011 CTXN2P0C2S0 81 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 RFX2P48378 723 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 LMO4P61968 165 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 Q5PR19 223 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 OR56B4Q8NH76 319 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 CABLES2Q9BTV7 478 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 TAS2R3Q9NYW6 316 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 JMJD1CQ15652 2540 aa17.03■□□□□ 0.32
SHISA4-201ENST00000362011 C15orf65H3BRN8 121 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 SDCBPO00560 298 aaPredicted RBP17.02■□□□□ 0.32
SHISA4-201ENST00000362011 SPINT2O43291 252 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 HBZP02008 142 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 ZNF735P0CB33 412 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 IL2RGP31785 369 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 SSTR5P35346 364 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 C11orf91Q3C1V1 193 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 IGSF11Q5DX21 431 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 OVCH2Q7RTZ1 564 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 TMEM17Q86X19 198 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 ARRDC1Q8N5I2 433 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 OR1L1Q8NH94 360 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 C8orf46Q8TAG6 207 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 UBALD1Q8TB05 177 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 GALMQ96C23 342 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 KIRREL1Q96J84 757 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 SLC6A7Q99884 636 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 CALYQ9NYX4 217 aa17.02■□□□□ 0.32
SHISA4-201ENST00000362011 IGHV4-61A0A0C4DH41 118 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 BET1O15155 118 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 PHF1O43189 567 aaPredicted RBP17.01■□□□□ 0.31
SHISA4-201ENST00000362011 DIRAS3O95661 229 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 PTTG1O95997 202 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 OR5H8P0DN80 308 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 CGB3P0DN86 165 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 CGB7P0DN87 165 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 BTCP35070 178 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 TSPAN5P62079 268 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 ZNF273Q14593 569 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 HERPUD1Q15011 391 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 CD276Q5ZPR3 534 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 TMEM200BQ69YZ2 307 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 ENKURQ8TC29 256 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 IL1F10Q8WWZ1 152 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 GAL3ST2Q9H3Q3 398 aa17.01■□□□□ 0.31
SHISA4-201ENST00000362011 RPUSD1Q9UJJ7 312 aaKnown RBP17.01■□□□□ 0.31
SHISA4-201ENST00000362011 IGKV1-6A0A0C4DH72 117 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 KBTBD11-OT1A0A1B0GTJ5 212 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 FAM240BA0A1B0GVZ2 78 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 A0A1W2PPH5 198 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 A8MXK9 166 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 C17orf58Q2M2W7 97 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 OR51S1Q8NGJ8 323 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 ZNF714Q96N38 554 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 PRRT1Q99946 306 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 GINS4Q9BRT9 223 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 DPAGT1Q9H3H5 408 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 SLC2A8Q9NY64 477 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 SCP2D1Q9UJQ7 156 aa17■□□□□ 0.31
SHISA4-201ENST00000362011 LOC105371242A0A075B767 164 aa16.99■□□□□ 0.31
SHISA4-201ENST00000362011 SCGB2B2Q4G0G5 96 aa16.99■□□□□ 0.31
SHISA4-201ENST00000362011 OR10J5Q8NHC4 309 aa16.99■□□□□ 0.31
SHISA4-201ENST00000362011 RFESDQ8TAC1 157 aa16.99■□□□□ 0.31
SHISA4-201ENST00000362011 SLC23A1Q9UHI7 598 aa16.99■□□□□ 0.31
SHISA4-201ENST00000362011 TRBV6-7A0A0A0MS04 114 aa16.98■□□□□ 0.31
SHISA4-201ENST00000362011 PPIAL4CA0A0B4J2A2 164 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms