RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 WDR61Q9GZS3 305 aaKnown RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 TRBV23-1A0A0A0MS06 115 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 MGST3O14880 152 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 MMP7P09237 267 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 SLC6A1P30531 599 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 CEBPDP49716 269 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 SNAI3Q3KNW1 292 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 MYPOPQ86VE0 399 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 ABHD17AQ96GS6 310 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 MRPS18AQ9NVS2 196 aaKnown RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 PRNDQ9UKY0 176 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 A0A1W2PNV4 684 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 AANATQ16613 207 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 LYZL2Q7Z4W2 148 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 GPX7Q96SL4 187 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 ASCL3Q9NQ33 180 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 SF3B6Q9Y3B4 125 aaKnown RBP16.1■□□□□ 0.17
CLIP2-202ENST00000361545 LHFPL6Q9Y693 200 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 WSB1Q9Y6I7 421 aa16.1■□□□□ 0.17
CLIP2-202ENST00000361545 FCER1GP30273 86 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 ERVFRD-1P60508 538 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 ATP6V1FQ16864 119 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 J3KRW8 73 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 K7N7A8 449 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 HTN1P15515 57 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 ADAD2Q8NCV1 583 aaKnown RBP16.09■□□□□ 0.17
CLIP2-202ENST00000361545 SFXN3Q9BWM7 321 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 GAR1Q9NY12 217 aaKnown RBP16.09■□□□□ 0.17
CLIP2-202ENST00000361545 NCOR1O75376 2440 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 A1L4Q6 167 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 ZNF737O75373 536 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 CYB5R3P00387 301 aaPredicted RBP16.09■□□□□ 0.17
CLIP2-202ENST00000361545 ATP5J2P56134 94 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 NKX2-6A6NCS4 301 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 SIPA1L1O43166 1804 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 LMX1BO60663 402 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 S100A8P05109 93 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 GNG4P50150 75 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 IL24Q13007 206 aa16.09■□□□□ 0.17
CLIP2-202ENST00000361545 IGKV1D-42A0A075B6H8 117 aa16.08■□□□□ 0.17
CLIP2-202ENST00000361545 OR2H2O95918 312 aa16.08■□□□□ 0.17
CLIP2-202ENST00000361545 ZNF596Q8TC21 504 aa16.08■□□□□ 0.17
CLIP2-202ENST00000361545 RIF1Q5UIP0 2472 aaKnown RBP16.08■□□□□ 0.16
CLIP2-202ENST00000361545 RPS4Y1P22090 263 aaKnown RBP16.08■□□□□ 0.16
CLIP2-202ENST00000361545 CRIPAKQ8N1N5 446 aa16.08■□□□□ 0.16
CLIP2-202ENST00000361545 Q9N2K0 584 aa16.08■□□□□ 0.16
CLIP2-202ENST00000361545 OR8G5Q8NG78 346 aa16.08■□□□□ 0.16
CLIP2-202ENST00000361545 KLF14Q8TD94 323 aaPredicted RBP16.08■□□□□ 0.16
CLIP2-202ENST00000361545 GOLT1BQ9Y3E0 138 aa16.08■□□□□ 0.16
CLIP2-202ENST00000361545 KIF13BQ9NQT8 1826 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 RAB29O14966 203 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 FGF12P61328 243 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 SIGLECL1Q8N7X8 197 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 ABHD14BQ96IU4 210 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 DSPPQ9NZW4 1301 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 HBZP02008 142 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 FCGR3AP08637 254 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 RNF151Q2KHN1 245 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 WFDC3Q8IUB2 231 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 OR8I2Q8N0Y5 310 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 ANGPTL6Q8NI99 470 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 IFT22Q9H7X7 185 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 ZDHHC8Q9ULC8 765 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 SCN2AQ99250 2005 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 MPV17P39210 176 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 IGSF11Q5DX21 431 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 HOGA1Q86XE5 327 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 PDPNQ86YL7 162 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 OR1L8Q8NGR8 309 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 Q8WTZ3 238 aa16.07■□□□□ 0.16
CLIP2-202ENST00000361545 RIPPLY2Q5TAB7 128 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 FAM78BQ5VT40 261 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 DUSP18Q8NEJ0 188 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 CHRNA10Q9GZZ6 450 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 RABAC1Q9UI14 185 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 KLK13Q9UKR3 277 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 J3QR06 171 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 IFI6P09912 130 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 SHISA5Q8N114 240 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 CHCHD2Q9Y6H1 151 aaPredicted RBP16.06■□□□□ 0.16
CLIP2-202ENST00000361545 TUBGCP6Q96RT7 1819 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 KCNMB1Q16558 191 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 SEZ6L2Q6UXD5 910 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 SLC25A42Q86VD7 318 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 ZBTB34Q8NCN2 500 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 MMP24Q9Y5R2 645 aa16.06■□□□□ 0.16
CLIP2-202ENST00000361545 ZNF703Q9H7S9 590 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-202ENST00000361545 GREB1LQ9C091 1923 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-202ENST00000361545 DAOP14920 347 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 SUCLG1P53597 346 aaKnown RBP16.05■□□□□ 0.16
CLIP2-202ENST00000361545 DYNLRB2Q8TF09 96 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 HLA-GP17693 338 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 ROM1Q03395 351 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 ZNF658BQ4V348 819 aaPredicted RBP16.05■□□□□ 0.16
CLIP2-202ENST00000361545 CLRN3Q8NCR9 226 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 BVESQ8NE79 360 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 RECKO95980 971 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 CRHP06850 196 aa16.05■□□□□ 0.16
CLIP2-202ENST00000361545 P2RY1P47900 373 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms