RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 DNAJC25-GNG10A0A024R161 153 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 ADAP1O75689 374 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 ARF6P62330 175 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 HMX2A2RU54 273 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 MMP9P14780 707 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 MEF2BQ02080 365 aaPredicted RBP8.21□□□□□ -1.1
VPS13A-203ENST00000360280 CYB561D1Q8N8Q1 229 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 C8orf44Q96CB5 159 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 GBF1Q92538 1859 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 WNT9BO14905 357 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 GALNT14Q96FL9 552 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 RABAC1Q9UI14 185 aa8.21□□□□□ -1.1
VPS13A-203ENST00000360280 KCNMB1Q16558 191 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 C1QTNF9BB2RNN3 333 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 ZNF774Q6NX45 483 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 ALG14Q96F25 216 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 FGF22Q9HCT0 170 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 RCC2Q9P258 522 aaKnown RBP8.2□□□□□ -1.1
VPS13A-203ENST00000360280 C10orf128Q5T292 105 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 ZNF770Q6IQ21 691 aaPredicted RBP8.2□□□□□ -1.1
VPS13A-203ENST00000360280 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 UBALD2Q8IYN6 164 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 ABHD1Q96SE0 405 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 GEMIN7Q9H840 131 aaKnown RBP8.2□□□□□ -1.1
VPS13A-203ENST00000360280 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM189A5PLL7 270 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 FMODQ06828 376 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 ALKBH7Q9BT30 221 aaPredicted RBP8.2□□□□□ -1.1
VPS13A-203ENST00000360280 TYMSP04818 313 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 STPG3Q8N7X2 389 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 ZNF418Q8TF45 676 aaPredicted RBP8.2□□□□□ -1.1
VPS13A-203ENST00000360280 DMRT1Q9Y5R6 373 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 LDLRAD3Q86YD5 345 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 CLN8Q9UBY8 286 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 MMP17Q9ULZ9 603 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 TMEM211Q6ICI0 200 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 TCF24Q7RTU0 167 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 CXCL3P19876 107 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 RARRES2Q99969 163 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 RHNO1Q9BSD3 238 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 GHITMQ9H3K2 345 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 OR4C45A6NMZ5 311 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 SFRP2Q96HF1 295 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 MRGPRX1Q96LB2 322 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 LINC00615Q96LM1 132 aaPredicted RBP8.2□□□□□ -1.1
VPS13A-203ENST00000360280 NPVFQ9HCQ7 196 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 KCNK7Q9Y2U2 307 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 IGHV3-43A0A0B4J1X8 118 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 IGHV3-43DP0DP04 118 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 RPS20P60866 119 aaKnown RBP8.2□□□□□ -1.1
VPS13A-203ENST00000360280 SLC25A40Q8TBP6 338 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 C4orf45Q96LM5 186 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 WNT5BQ9H1J7 359 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 HSPB7Q9UBY9 170 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 TNFSF18Q9UNG2 199 aa8.2□□□□□ -1.1
VPS13A-203ENST00000360280 C2orf83Q53S99 150 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 CCDC144NLQ6NUI1 221 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 RFLNAQ6ZTI6 216 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 HARBI1Q96MB7 349 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 DOCK6Q96HP0 2047 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 PRDX2P32119 198 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 MRGPRX3Q96LB0 322 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 CD300LDQ6UXZ3 194 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 RFESDQ8TAC1 157 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 SHISA4Q96DD7 197 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 ST6GAL2Q96JF0 529 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 INSIG2Q9Y5U4 225 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 ARID2Q68CP9 1835 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 KIAA1551Q9HCM1 1747 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 F11P03951 625 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 HIST1H1AQ02539 215 aaPredicted RBP8.19□□□□□ -1.1
VPS13A-203ENST00000360280 SKP2Q13309 424 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 MOGAT3Q86VF5 341 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 ZG16BQ96DA0 208 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 OR51M1Q9H341 326 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 OR10AC1Q8NH08 325 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 P2RX4Q99571 388 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 PSMG3Q9BT73 122 aaPredicted RBP8.19□□□□□ -1.1
VPS13A-203ENST00000360280 MRPS11P82912 194 aaKnown RBP8.19□□□□□ -1.1
VPS13A-203ENST00000360280 EBLN2Q6P2I7 272 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 C16orf92Q96LL3 132 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 METTL26Q96S19 204 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 FZD5Q13467 585 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 OTPQ5XKR4 325 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 TIMP4Q99727 224 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 SIRT5Q9NXA8 310 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 TRGV5A0A0B4J1U4 118 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 GABRG2P18507 467 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 GAPTQ8N292 157 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 OR11G2Q8NGC1 345 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 KIR2DL4Q99706 377 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 TMEFF2Q9UIK5 374 aaPredicted RBP8.19□□□□□ -1.1
VPS13A-203ENST00000360280 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 IGHV4-34P06331 123 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 NAAAQ02083 359 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 ZNF117Q03924 483 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 OR10S1Q8NGN2 331 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 ZCCHC14Q8WYQ9 949 aaKnown RBP8.19□□□□□ -1.1
VPS13A-203ENST00000360280 FER1L5A0AVI2 2057 aa8.19□□□□□ -1.1
VPS13A-203ENST00000360280 MEIG1Q5JSS6 88 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms