RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 C14orf166Q9Y224 244 aaKnown RBP19.27■□□□□ 0.68
SDF4-202ENST00000360001 C9orf170A2RU37 121 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 CXCL3P19876 107 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 ERP29P30040 261 aaKnown RBP19.26■□□□□ 0.67
SDF4-202ENST00000360001 EDDM3BP56851 147 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 CR1LQ2VPA4 569 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 NEU4Q8WWR8 484 aaPredicted RBP19.26■□□□□ 0.67
SDF4-202ENST00000360001 RANGRFQ9HD47 186 aaPredicted RBP19.26■□□□□ 0.67
SDF4-202ENST00000360001 DSCAML1Q8TD84 2053 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 MEX3AA1L020 520 aaKnown RBP19.26■□□□□ 0.67
SDF4-202ENST00000360001 LY6HO94772 140 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 HBZP02008 142 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 TRAT1Q6PIZ9 186 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 TMEM246Q9BRR3 403 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 DLL4Q9NR61 685 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 LRRK2Q5S007 2527 aa19.26■□□□□ 0.67
SDF4-202ENST00000360001 FAM172BPA6NC97 362 aa19.25■□□□□ 0.67
SDF4-202ENST00000360001 C15orf65H3BRN8 121 aa19.25■□□□□ 0.67
SDF4-202ENST00000360001 HEXAP06865 529 aa19.25■□□□□ 0.67
SDF4-202ENST00000360001 SSTR5P35346 364 aa19.25■□□□□ 0.67
SDF4-202ENST00000360001 LYPD2Q6UXB3 125 aa19.25■□□□□ 0.67
SDF4-202ENST00000360001 FGFRL1Q8N441 504 aa19.25■□□□□ 0.67
SDF4-202ENST00000360001 FYTTD1Q96QD9 318 aaKnown RBP19.25■□□□□ 0.67
SDF4-202ENST00000360001 IGKV1D-13A0A0B4J2D9 117 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 FCN3O75636 299 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 IGKV1-13P0DP09 117 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 RPS2P15880 293 aaKnown RBP19.24■□□□□ 0.67
SDF4-202ENST00000360001 VAMP1P23763 118 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 SUPT4H1P63272 117 aaKnown RBP19.24■□□□□ 0.67
SDF4-202ENST00000360001 MRPS11P82912 194 aaKnown RBP19.24■□□□□ 0.67
SDF4-202ENST00000360001 SLC38A6Q8IZM9 456 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 GALMQ96C23 342 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 RSRP1Q9BUV0 290 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 FSTL3O95633 263 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 LDLRAD3Q86YD5 345 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 ARL11Q969Q4 196 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 C14orf79Q96F83 325 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 OPN4Q9UHM6 478 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 OR2W1Q9Y3N9 320 aa19.24■□□□□ 0.67
SDF4-202ENST00000360001 UTP20O75691 2785 aaKnown RBP19.24■□□□□ 0.67
SDF4-202ENST00000360001 ADAM20O43506 726 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 GZMHP20718 246 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 IL2RGP31785 369 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 CDKN1AP38936 164 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 TLE4Q04727 773 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 KCNJ8Q15842 424 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 C12orf45Q8N5I9 185 aaPredicted RBP19.23■□□□□ 0.67
SDF4-202ENST00000360001 ZNF565Q8N9K5 539 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 OR6C3Q9NZP0 311 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 KAAG1Q9UBP8 84 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 HSPA12AO43301 675 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 IGHV2-70P01814 119 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 DAOP14920 347 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 GNRHRP30968 328 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 SPICQ8N5J4 248 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 OR2AK2Q8NG84 335 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 MITD1Q8WV92 249 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 SECTM1Q8WVN6 248 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 RDH8Q9NYR8 311 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 CTSZQ9UBR2 303 aa19.23■□□□□ 0.67
SDF4-202ENST00000360001 SLC25A10Q9UBX3 287 aaPredicted RBP19.23■□□□□ 0.67
SDF4-202ENST00000360001 NDUFA2O43678 99 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 SFT2D2O95562 160 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 CLDN1O95832 211 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 CGB3P0DN86 165 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 CGB7P0DN87 165 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 PIGPP57054 158 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 C2orf68Q2NKX9 166 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 CLEC18BQ6UXF7 455 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 UXS1Q8NBZ7 420 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 RFESDQ8TAC1 157 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 PARP12Q9H0J9 701 aaKnown RBP19.22■□□□□ 0.67
SDF4-202ENST00000360001 PLEKHF2Q9H8W4 249 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 MGAT4CQ9UBM8 478 aa19.22■□□□□ 0.67
SDF4-202ENST00000360001 DUS4LO95620 317 aaKnown RBP19.21■□□□□ 0.67
SDF4-202ENST00000360001 CEACAM6P40199 344 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 PHLDA2Q53GA4 152 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 FAM53AQ6NSI3 398 aaPredicted RBP19.21■□□□□ 0.67
SDF4-202ENST00000360001 TCF23Q7RTU1 214 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 OR52L2PQ8NGH6 319 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 CASTOR1Q8WTX7 329 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 SLC5A7Q9GZV3 580 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 SLC2A9Q9NRM0 540 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 USF3Q68DE3 2245 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 CRYM-AS1A6NIL9 109 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 SPINT2O43291 252 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 NDUFB7P17568 137 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 CD34P28906 385 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 GNMTQ14749 295 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 ABCA11PQ4W5N1 156 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 LPCAT3Q6P1A2 487 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 TCTE3Q8IZS6 198 aa19.21■□□□□ 0.67
SDF4-202ENST00000360001 ZNF486Q96H40 463 aaPredicted RBP19.21■□□□□ 0.67
SDF4-202ENST00000360001 CLEC4MQ9H2X3 399 aaPredicted RBP19.21■□□□□ 0.67
SDF4-202ENST00000360001 SLC9A3R2Q15599 337 aa19.2■□□□□ 0.66
SDF4-202ENST00000360001 DMRTB1Q96MA1 342 aa19.2■□□□□ 0.66
SDF4-202ENST00000360001 TOLLIPQ9H0E2 274 aa19.2■□□□□ 0.66
SDF4-202ENST00000360001 CLEC18AA5D8T8 446 aa19.19■□□□□ 0.66
SDF4-202ENST00000360001 NDUFB3O43676 98 aa19.19■□□□□ 0.66
SDF4-202ENST00000360001 HTD2P86397 168 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms