RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 IFNA1P01562 189 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 GAPDHP04406 335 aaKnown RBP9.57□□□□□ -0.88
SSU72-202ENST00000359060 ATP6V0CP27449 155 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 OR2B8PP59922 312 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 FLI1Q01543 452 aaPredicted RBP9.57□□□□□ -0.88
SSU72-202ENST00000359060 LDLRAD3Q86YD5 345 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 TMEM252Q8N6L7 170 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 FDCSPQ8NFU4 85 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 HPSE2Q8WWQ2 592 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 GALNT14Q96FL9 552 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 SLC39A9Q9NUM3 307 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 OR1A1Q9P1Q5 309 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 AUP1Q9Y679 476 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 HBE1P02100 147 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 COX5BP10606 129 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 F2RP25116 425 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 TAGLN2P37802 199 aaKnown RBP9.57□□□□□ -0.88
SSU72-202ENST00000359060 ERVK-16P61578 105 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 TESK1Q15569 626 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 H2BFWTQ7Z2G1 175 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 OR2D2Q9H210 308 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 ENY2Q9NPA8 101 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 PARP11Q9NR21 331 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 IGKV1D-13A0A0B4J2D9 117 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 PQLC2LA1A4F0 135 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 CLEC18AA5D8T8 446 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 TXNL1O43396 289 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 OR2H2O95918 312 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 CRYAAP02489 173 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 FTH1P19P0C7X4 201 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 IGKV1-13P0DP09 117 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 BAXQ07812 192 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 AESQ08117 197 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 FAM214BQ7L5A3 538 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 CLEC18CQ8NCF0 446 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 HS3ST6Q96QI5 342 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 NIPSNAP3BQ9BS92 247 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 NDRG3Q9UGV2 375 aa9.57□□□□□ -0.88
SSU72-202ENST00000359060 SEC11BP0C7V7 166 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 SPINK9Q5DT21 86 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 SCCPDHQ8NBX0 429 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 OR4A4PQ8NGN8 299 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 OR5P3Q8WZ94 311 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 BSCL2Q96G97 398 aaPredicted RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 IL36GQ9NZH8 169 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 DOCK11Q5JSL3 2073 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 LOC105371267A0A1B0GV96 52 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 HMGB3O15347 200 aaKnown RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 SPRY3O43610 288 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 HAND1O96004 215 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 IRF2P14316 349 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 UCP2P55851 309 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 SRSF4Q08170 494 aaKnown RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 BTNL3Q6UXE8 466 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 EIF4E3Q8N5X7 224 aaKnown RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 UBAC2Q8NBM4 344 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 LIME1Q9H400 295 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 ATPIF1Q9UII2 106 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 IGKV3D-15A0A087WSY6 115 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 LILRA1O75019 489 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 PGLYRP1O75594 196 aaPredicted RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 IFNA10P01566 189 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 MZT1Q08AG7 82 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 SMIM21Q3B7S5 101 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 MOB1BQ7L9L4 216 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 RCC2Q9P258 522 aaKnown RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 PSG11Q9UQ72 335 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 ZNF318Q5VUA4 2279 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 SPTBN1Q01082 2364 aaKnown RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 TRBV6-7A0A0A0MS04 114 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A10PA6NDY2 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A18PA6NE21 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A16PA6NEW6 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A20PA6NIJ5 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A8PA6NJQ4 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A7PA6NKC0 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A22PA8MWA6 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A12PA8MX19 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A5PA8MXJ8 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A23PA8MXZ1 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 ARG1P05089 322 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A15PP0C7V4 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A13PP0C7W8 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A14PP0C7W9 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 FAM90A24PP0C7X0 464 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 UCP3P55916 312 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 TMEM42Q69YG0 159 aa9.56□□□□□ -0.88
SSU72-202ENST00000359060 SELENOHQ8IZQ5 122 aaKnown RBP9.56□□□□□ -0.88
SSU72-202ENST00000359060 LRRC29Q8WV35 223 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 FAM117AQ9C073 453 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 UBE2L5PA0A1B0GUS4 154 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 PRSS44E7EML9 344 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 KLK10O43240 276 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 SYNGR2O43760 224 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 IFNA4P05014 189 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 ZNF528Q3MIS6 628 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
SSU72-202ENST00000359060 AWAT1Q58HT5 328 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms