RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 OR1A1Q9P1Q5 309 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 KIAA1456Q9P272 454 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 ERRFI1Q9UJM3 462 aaPredicted RBP7.32□□□□□ -1.24
RFX3-202ENST00000358730 RNF115Q9Y4L5 304 aa7.32□□□□□ -1.24
RFX3-202ENST00000358730 A0A1W2PPE3 182 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 C5orf52A6NGY3 159 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 DEGS1O15121 323 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 ACAA1P09110 424 aaPredicted RBP7.31□□□□□ -1.24
RFX3-202ENST00000358730 AGAP20933 346 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 MPLP40238 635 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 OR2B8PP59922 312 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 RPS23P62266 143 aaKnown RBP7.31□□□□□ -1.24
RFX3-202ENST00000358730 TMEM267Q0VDI3 215 aaPredicted RBP7.31□□□□□ -1.24
RFX3-202ENST00000358730 IL24Q13007 206 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 IZUMO4Q1ZYL8 232 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 SLC25A24Q6NUK1 477 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 ADAM5Q6NVV9 412 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 P4HA3Q7Z4N8 544 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 VASH2Q86V25 355 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 H1FOOQ8IZA3 346 aaPredicted RBP7.31□□□□□ -1.24
RFX3-202ENST00000358730 TECTAO75443 2155 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 FRYQ5TBA9 3013 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 TRBV6-6A0A0A6YYG2 114 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 TRAV39A0A0B4J263 110 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 A0A1W2PNU3 283 aaPredicted RBP7.31□□□□□ -1.24
RFX3-202ENST00000358730 MEOX1P50221 254 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 PAX9P55771 341 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 OR8G1Q15617 311 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 TMEM164Q5U3C3 297 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 GPR146Q96CH1 333 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 CABLES2Q9BTV7 478 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 ARRDC1-AS1Q9H2J1 176 aa7.31□□□□□ -1.24
RFX3-202ENST00000358730 UNKLQ9H9P5 680 aaKnown RBP7.31□□□□□ -1.24
RFX3-202ENST00000358730 C21orf140B9A014 251 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 J3QT63 122 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 UBE2CO00762 179 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 OR2C1O95371 312 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 CNOT4O95628 575 aaKnown RBP7.3□□□□□ -1.24
RFX3-202ENST00000358730 IL18BPO95998 194 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 MT-CO3P00414 261 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 RPL23AP62750 156 aaKnown RBP7.3□□□□□ -1.24
RFX3-202ENST00000358730 RBMS3Q6XE24 437 aaKnown RBP7.3□□□□□ -1.24
RFX3-202ENST00000358730 MDP1Q86V88 176 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 OR10V1Q8NGI7 309 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 NANOS1Q8WY41 292 aaKnown RBP7.3□□□□□ -1.24
RFX3-202ENST00000358730 GUCD1Q96NT3 240 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 GPR87Q9BY21 358 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 BCL2L14Q9BZR8 327 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 PKIBQ9C010 78 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 OR51I2Q9H344 312 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 KCNS2Q9ULS6 477 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 A0A1B0GU03 582 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 H3BQ15 152 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 SIRPB1O00241 398 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 DFFBO76075 338 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 TLE4Q04727 773 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 FABP9Q0Z7S8 132 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 ZNF880Q6PDB4 577 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 CYB561D1Q8N8Q1 229 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 OR1K1Q8NGR3 316 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 UBALD1Q8TB05 177 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 CACNG5Q9UF02 275 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 PPP1R3CQ9UQK1 317 aa7.3□□□□□ -1.24
RFX3-202ENST00000358730 COLQQ9Y215 455 aaPredicted RBP7.3□□□□□ -1.24
RFX3-202ENST00000358730 RBM7Q9Y580 266 aaKnown RBP7.3□□□□□ -1.24
RFX3-202ENST00000358730 PIGBOS1A0A0B4J2F0 54 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 LNP1A1A4G5 178 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 H0YL77 283 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 TXNL1O43396 289 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 SCAF4O95104 1147 aaKnown RBP7.29□□□□□ -1.24
RFX3-202ENST00000358730 IFNA5P01569 189 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 S100A8P05109 93 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 SRP19P09132 144 aaKnown RBP7.29□□□□□ -1.24
RFX3-202ENST00000358730 ZNF806P0C7X5 589 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 ZNF883P0CG24 379 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 ZNF16P17020 682 aaPredicted RBP7.29□□□□□ -1.24
RFX3-202ENST00000358730 TAS2R30P59541 319 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 RAB2AP61019 212 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 ICAM4Q14773 271 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 THNSL2Q86YJ6 484 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 ZNF295-AS1Q8N0V1 137 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 RAB40CQ96S21 281 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 IFT22Q9H7X7 185 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 KLF13Q9Y2Y9 288 aaPredicted RBP7.29□□□□□ -1.24
RFX3-202ENST00000358730 KIAA2026Q5HYC2 2103 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 HBE1P02100 147 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 S100A9P06702 114 aaKnown RBP7.29□□□□□ -1.24
RFX3-202ENST00000358730 SP1P08047 785 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 FBP1P09467 338 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 SMIM6P0DI80 62 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 IAPPP10997 89 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 CEACAM1P13688 526 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 UBE2KP61086 200 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 DBX2Q6ZNG2 339 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 RAB39BQ96DA2 213 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 RBMXL1Q96E39 390 aaKnown RBP7.29□□□□□ -1.24
RFX3-202ENST00000358730 RTL8AQ9BWD3 113 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 IL17BQ9UHF5 180 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 TRAPPC2LQ9UL33 140 aa7.29□□□□□ -1.24
RFX3-202ENST00000358730 WSB1Q9Y6I7 421 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms