RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 OR4C12Q96R67 309 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 AKIRIN1Q9H9L7 192 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 DMBT1Q9UGM3 2413 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 G3V3Y1 287 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 MYBPHQ13203 477 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 PARM1Q6UWI2 310 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 OR1F12Q8NHA8 337 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 EMC6Q9BV81 110 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF665Q9H7R5 613 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SLC25A5P05141 298 aaKnown RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 LSRQ86X29 649 aaPredicted RBP5.35□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM252Q8N6L7 170 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 KCNS1Q96KK3 526 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF391Q9UJN7 358 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 SSC5DA1L4H1 1573 aa5.35□□□□□ -1.55
VPS13B-203ENST00000358544 TRBV9A0A0B4J1U6 114 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 PMS2P1A4D2B8 440 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 SYNGR2O43760 224 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 FAM87AP0C7U9 286 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 NR2C2APQ86WQ0 139 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF683Q8IZ20 524 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 OSR2Q8N2R0 312 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 SEMA4FO95754 770 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 ARF6P62330 175 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 NIT1Q86X76 327 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 RCC1LQ96I51 464 aaKnown RBP5.34□□□□□ -1.55
VPS13B-203ENST00000358544 GUCD1Q96NT3 240 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 GAPTQ8N292 157 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 GBGT1Q8N5D6 347 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 DEFB119Q8N690 84 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 P2RX4Q99571 388 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 VCX2Q9H322 139 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF430Q9H8G1 570 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-203ENST00000358544 SLC7A10Q9NS82 523 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 NUDT16L1Q9BRJ7 211 aaKnown RBP5.34□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM222Q9H0R3 208 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 H3BMH7 237 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 FGF16O43320 207 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 TBX6O95947 436 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-203ENST00000358544 PNLIPP16233 465 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 TMEM38BQ9NVV0 291 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 OR8B8Q15620 311 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 MEX3AA1L020 520 aaKnown RBP5.34□□□□□ -1.55
VPS13B-203ENST00000358544 ZNF732B4DXR9 585 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 TNFSF13O75888 250 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 SSR4P51571 173 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 C17orf67Q0P5P2 114 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 ICAM4Q14773 271 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 LAMTOR2Q9Y2Q5 125 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 OR4X1Q8NH49 305 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 FAM117AQ9C073 453 aa5.34□□□□□ -1.55
VPS13B-203ENST00000358544 NKX6-3A6NJ46 265 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 NCBP2LA6PVI3 153 aaKnown RBP5.34□□□□□ -1.56
VPS13B-203ENST00000358544 VAMP5O95183 116 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 ACRP10323 421 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 NUBP1P53384 320 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 NANOS3P60323 173 aaKnown RBP5.34□□□□□ -1.56
VPS13B-203ENST00000358544 INSM1Q01101 510 aaPredicted RBP5.34□□□□□ -1.56
VPS13B-203ENST00000358544 SHISA6Q6ZSJ9 500 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 NOXO1Q8NFA2 376 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 NT5CQ8TCD5 201 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 F11RQ9Y624 299 aaKnown RBP5.34□□□□□ -1.56
VPS13B-203ENST00000358544 DNAJC25-GNG10A0A024R161 153 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 SHISA3A0PJX4 238 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 CBLN1P23435 193 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 FOLR3P41439 243 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 OR5A1Q8NGJ0 315 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM170AQ8WVE7 144 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 TOX2Q96NM4 488 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 MFRPQ9BY79 579 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 SAP30LQ9HAJ7 183 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 TET2Q6N021 2002 aaPredicted RBP5.34□□□□□ -1.56
VPS13B-203ENST00000358544 A0A1W2PRS3 328 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 HELTA6NFD8 242 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 ARG2P78540 354 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 ASB5Q8WWX0 329 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 MUCL1Q96DR8 90 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 MRGPRX3Q96LB0 322 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM70Q9BUB7 260 aa5.34□□□□□ -1.56
VPS13B-203ENST00000358544 FOXD3Q9UJU5 478 aaPredicted RBP5.34□□□□□ -1.56
VPS13B-203ENST00000358544 SRP19P09132 144 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PLXDC1Q8IUK5 500 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PSMG3Q9BT73 122 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 EXPH5Q8NEV8 1989 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PLXNA1Q9UIW2 1896 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 TRAV14DV4A0A0A6YYC5 116 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM30CPA0ZSE6 113 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 ZGLP1P0C6A0 271 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 CEACAM6P40199 344 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 LY6G6FQ5SQ64 297 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 TMEM45BQ96B21 275 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 S1PR3Q99500 378 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 COL14A1Q05707 1796 aaKnown RBP5.33□□□□□ -1.56
VPS13B-203ENST00000358544 NKX2-2O95096 273 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 SRIP30626 198 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 LRP5O75197 1615 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 PSMB2P49721 201 aa5.33□□□□□ -1.56
VPS13B-203ENST00000358544 C1orf100Q5SVJ3 147 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms