RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 CCDC144NLQ6NUI1 221 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 SLC25A42Q86VD7 318 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 C1orf174Q8IYL3 243 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 WFDC12Q8WWY7 111 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 LRP12Q9Y561 859 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 TNFRSF18Q9Y5U5 241 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 H3BTX0 84 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 TFAP2AP05549 437 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 CKS2P33552 79 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 LIAT1Q6ZQX7 453 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 STHQ8IWL8 128 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 AMER3Q8N944 861 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 ZPLD1Q8TCW7 415 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 HDGFL3Q9Y3E1 203 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 SCN9AQ15858 1988 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 OR5AN1Q8NGI8 311 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 FAM216AQ8WUB2 273 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 PGLYRP4Q96LB8 373 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 ZNF714Q96N38 554 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 NRTNQ99748 197 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 TSPAN2O60636 221 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 ANOS1P23352 680 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 MMP11P24347 488 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 NUTF2P61970 127 aaKnown RBP8.59□□□□□ -1.03
CHD3-202ENST00000358181 EGR3Q06889 387 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 PPIAL4EA0A075B759 164 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 PPIAL4DF5H284 164 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 CEACAM4O75871 244 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 PPIAL4FP0DN26 164 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 CDKN2AP42771 156 aaKnown RBP8.59□□□□□ -1.03
CHD3-202ENST00000358181 CTU2Q2VPK5 515 aaKnown RBP8.59□□□□□ -1.03
CHD3-202ENST00000358181 METRNLQ641Q3 311 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 KIRREL2Q6UWL6 708 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 ZBTB34Q8NCN2 500 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 C10orf90Q96M02 699 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 SLC52A3Q9NQ40 469 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 LYRM2Q9NU23 88 aaPredicted RBP8.59□□□□□ -1.03
CHD3-202ENST00000358181 PPIAL4AQ9Y536 164 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 ANKRD36CQ5JPF3 1778 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 KBTBD11O94819 623 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 AVPR2P30518 371 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 EFNB2P52799 333 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 GAB4Q2WGN9 574 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 FRRS1LQ9P0K9 344 aa8.59□□□□□ -1.03
CHD3-202ENST00000358181 MBD1Q9UIS9 605 aaPredicted RBP8.59□□□□□ -1.03
CHD3-202ENST00000358181 MC5RP33032 325 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 CD69Q07108 199 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 DHRS2Q13268 280 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 ANXA2RQ3ZCQ2 193 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 ZNF880Q6PDB4 577 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 YBX2Q9Y2T7 364 aaKnown RBP8.58□□□□□ -1.04
CHD3-202ENST00000358181 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.58□□□□□ -1.04
CHD3-202ENST00000358181 CLPSL1A2RUU4 121 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 GLDNQ6ZMI3 551 aaPredicted RBP8.58□□□□□ -1.04
CHD3-202ENST00000358181 PYCARD-AS1I3L0S3 204 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
CHD3-202ENST00000358181 PPICP45877 212 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 MGAT2Q10469 447 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 RSPO4Q2I0M5 234 aaPredicted RBP8.58□□□□□ -1.04
CHD3-202ENST00000358181 BSXQ3C1V8 233 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 VSTM2AQ8TAG5 236 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 SPSB4Q96A44 273 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 NEURL3Q96EH8 262 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 HSF4Q9ULV5 492 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 CST2P09228 141 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 ARF6P62330 175 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 SKP2Q13309 424 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 C1QL3Q5VWW1 255 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 PIPOXQ9P0Z9 390 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 PGPA6NDG6 321 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 PATE3B3GLJ2 98 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 TMEM127O75204 238 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 EMC4Q5J8M3 183 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 RAB33BQ9H082 229 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 WNT16Q9UBV4 365 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 CYB5R3P00387 301 aaPredicted RBP8.58□□□□□ -1.04
CHD3-202ENST00000358181 EIF3IQ13347 325 aaKnown RBP8.58□□□□□ -1.04
CHD3-202ENST00000358181 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 LINC01560Q8TB33 94 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 MIOXQ9UGB7 285 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 FOXJ3Q9UPW0 622 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 WSB1Q9Y6I7 421 aa8.58□□□□□ -1.04
CHD3-202ENST00000358181 M0R143 59 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 IGHV4-39P01824 125 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 ISG15P05161 165 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 CNTFRP26992 372 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 SSTR5P35346 364 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 CCR5P51681 352 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 TSPO2Q5TGU0 170 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 MRPL20Q9BYC9 149 aaKnown RBP8.57□□□□□ -1.04
CHD3-202ENST00000358181 TLNRD1Q9H1K6 362 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 MS4A5Q9H3V2 200 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 RASL12Q9NYN1 266 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 KCNE3Q9Y6H6 103 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 C11orf94C9JXX5 98 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 FABP2P12104 132 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 PRDX2P32119 198 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 PMELP40967 661 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms