RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 PACRGQ96M98 296 aaPredicted RBP6.37□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF714Q96N38 554 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 ASCL2Q99929 193 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 ARPC4-TTLL3A0A0A6YYG9 625 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 M0R3E3 92 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 GNG4P50150 75 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 PLEKHA2Q9HB19 425 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 CALYQ9NYX4 217 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 LIPT2A6NK58 231 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 RAF1P04049 648 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 FGF2P09038 288 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM128Q5BJH2 165 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 EBLN2Q6P2I7 272 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 SFTA2Q6UW10 78 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 CLEC19AQ6UXS0 136 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 ASB5Q8WWX0 329 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 COX14Q96I36 57 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 NPAS1Q99742 590 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 OR2T8A6NH00 312 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 MFNGO00587 321 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 SFT2D2O95562 160 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 ERVFRD-1P60508 538 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 C5orf24Q7Z6I8 188 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 GNPNAT1Q96EK6 184 aaPredicted RBP6.37□□□□□ -1.39
VPS13A-202ENST00000357409 PGLYRP4Q96LB8 373 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 PRSS27Q9BQR3 290 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 OR51B2Q9Y5P1 312 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 OR2H2O95918 312 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 AMMECR1LQ6DCA0 310 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 ERASQ7Z444 233 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 ZNF721Q8TF20 911 aa6.37□□□□□ -1.39
VPS13A-202ENST00000357409 LOC105371242A0A075B767 164 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 FCGR3AP08637 254 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 FBXL17Q9UF56 701 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 HS3ST3B1Q9Y662 390 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 LANCL1O43813 399 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 TSPAN2O60636 221 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 MOSP00540 346 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 ATOH7Q8N100 152 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SPSB1Q96BD6 273 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 ST6GAL2Q96JF0 529 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 OR2H1Q9GZK4 316 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 WDR61Q9GZS3 305 aaKnown RBP6.36□□□□□ -1.39
VPS13A-202ENST00000357409 KCNE1BA0A087WTH5 132 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 PRR32B1ATL7 298 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 PDCD6O75340 191 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SUCLG1P53597 346 aaKnown RBP6.36□□□□□ -1.39
VPS13A-202ENST00000357409 RPEL1Q2QD12 228 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 WDR25Q64LD2 544 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SLC16A13Q7RTY0 426 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 CYC1P08574 325 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 GATA2P23769 480 aaPredicted RBP6.36□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM33P57088 247 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 C10orf113Q5VZT2 155 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SNURFLB1AK76 121 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 PGLYRP3Q96LB9 341 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 KLK13Q9UKR3 277 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 ARFGEF2Q9Y6D5 1785 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 A0A0G2JMM0 328 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 A0A1W2PPB8 328 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 A0A1W2PRS3 328 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 KIR3DP1A8MWS1 328 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 IGHV3-53P01767 116 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SFTA3P0C7M3 94 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 CXCL3P19876 107 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 RELBQ01201 579 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 TOMM20LQ6UXN7 152 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 FAM214BQ7L5A3 538 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 OR2C3Q8N628 320 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 GHITMQ9H3K2 345 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 BCL2L10Q9HD36 194 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SNRPEP62304 92 aaKnown RBP6.36□□□□□ -1.39
VPS13A-202ENST00000357409 PPP1R32Q7Z5V6 425 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 PIMREGQ9BSJ6 248 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SHPRHQ149N8 1683 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 GON4LQ3T8J9 2241 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 IER3P46695 156 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 UNC119Q13432 240 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 HERPUD1Q15011 391 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SSX1Q16384 188 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM97Q5BJF2 176 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 OR1L1Q8NH94 360 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 PP6455Q8WZ26 134 aa6.36□□□□□ -1.39
VPS13A-202ENST00000357409 SF3B6Q9Y3B4 125 aaKnown RBP6.36□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM255AQ5JRV8 349 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 MYOZ3Q8TDC0 251 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 RECKO95980 971 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 HBZP02008 142 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 OR10J1P30954 320 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 CXorf66Q5JRM2 361 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-202ENST00000357409 Q6ZNX1 250 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 VN1R17PQ8TDU5 208 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 A0A0B4J293 547 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 RPS4Y1P22090 263 aaKnown RBP6.35□□□□□ -1.39
VPS13A-202ENST00000357409 FAM3BP58499 235 aaPredicted RBP6.35□□□□□ -1.39
VPS13A-202ENST00000357409 NPC2P61916 151 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 IGHV1-69-2A0A0G2JMI3 117 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 CEACAM18A8MTB9 384 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 PPP1R17O96001 155 aa6.35□□□□□ -1.39
VPS13A-202ENST00000357409 TMEM241Q24JQ0 296 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms