RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 DTX4Q9Y2E6 619 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 A0A1W2PNV4 684 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 MPDU1O75352 247 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 GYPAP02724 150 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 RPL13AP40429 203 aaKnown RBP10.25□□□□□ -0.77
COL9A1-202ENST00000357250 P2RY6Q15077 328 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 PRSS53Q2L4Q9 553 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 ZNF260Q3ZCT1 412 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 RIPPLY2Q5TAB7 128 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 TGIF2LYQ8IUE0 185 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 TGIF2LXQ8IUE1 241 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 OR10A7Q8NGE5 316 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 PLPPR2Q96GM1 343 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 PGLYRP3Q96LB9 341 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 NPTNQ9Y639 398 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 RGPD3A6NKT7 1758 aaPredicted RBP10.25□□□□□ -0.77
COL9A1-202ENST00000357250 IGSF23A1L1A6 192 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 MS4A18H0YCH9 400 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 CTSBP07858 339 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 NAT2P11245 290 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 MS4A18Q3C1V0 323 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 LYRM7Q5U5X0 104 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 FAM78BQ5VT40 261 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 PMS2CLQ68D20 193 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 OR1L8Q8NGR8 309 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 LINC00052Q96N35 136 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 UCN2Q96RP3 112 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 SAP30LQ9HAJ7 183 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 ROS1P08922 2347 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 WDR90Q96KV7 1748 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 C7orf77A4D0Y5 90 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 KIAA1324LA8MWY0 1029 aaPredicted RBP10.25□□□□□ -0.77
COL9A1-202ENST00000357250 CXorf1O96002 111 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 SMIM10L1P0DMW3 83 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 MEOX2P50222 304 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 CEACAM21Q3KPI0 293 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 ADAMTS17Q8TE56 1095 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 SMIM10Q96HG1 83 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 SYNGR1O43759 233 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 FGF5P12034 268 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 CRISP2P16562 243 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 RNASEKQ6P5S7 137 aaKnown RBP10.25□□□□□ -0.77
COL9A1-202ENST00000357250 SSX7Q7RTT5 188 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 ABHD3Q8WU67 409 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 TINAGQ9UJW2 476 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 PSME4Q14997 1843 aa10.25□□□□□ -0.77
COL9A1-202ENST00000357250 NKX2-6A6NCS4 301 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 M0R143 59 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 HLA-DQB1P01920 261 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 LGALS7P47929 136 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 FGF12P61328 243 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 FDX2Q6P4F2 183 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 OR4D10Q8NGI6 311 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 BDP1A6H8Y1 2624 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 GREB1Q4ZG55 1949 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 TRBV5-7A0A0A0MS05 114 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 GCM2O75603 506 aaPredicted RBP10.24□□□□□ -0.77
COL9A1-202ENST00000357250 FCGR3AP08637 254 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 NPY1RP25929 384 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 TMEM50BP56557 158 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 TSPO2Q5TGU0 170 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 LYZL2Q7Z4W2 148 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 FLYWCH2Q96CP2 140 aaKnown RBP10.24□□□□□ -0.77
COL9A1-202ENST00000357250 SCARF2Q96GP6 870 aaPredicted RBP10.24□□□□□ -0.77
COL9A1-202ENST00000357250 OR10C1Q96KK4 312 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 SIRT4Q9Y6E7 314 aaPredicted RBP10.24□□□□□ -0.77
COL9A1-202ENST00000357250 ACP1P24666 158 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 CEBPEQ15744 281 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 TNXAQ16473 311 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 SLC25A47Q6Q0C1 308 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 DDA1Q9BW61 102 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 TMEM191AQ9H0A3 160 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 HSF4Q9ULV5 492 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 FZR1Q9UM11 496 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 VSIG4Q9Y279 399 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 SBF1O95248 1867 aa10.24□□□□□ -0.77
COL9A1-202ENST00000357250 A0A0J9YW62 118 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 IFNL4K9M1U5 179 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 MGST3O14880 152 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 COX5BP10606 129 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 EFNB2P52799 333 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 CD300CQ08708 224 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 RIGQ13278 110 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 LBHQ53QV2 105 aaPredicted RBP10.23□□□□□ -0.77
COL9A1-202ENST00000357250 TEPPQ6URK8 271 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 UNQ9370/PRO34162Q6UXP9 181 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 DOLPP1Q86YN1 238 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 OR1L6Q8NGR2 347 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 RAB24Q969Q5 203 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 VPS25Q9BRG1 176 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 KLK13Q9UKR3 277 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 MRPS18BQ9Y676 258 aaKnown RBP10.23□□□□□ -0.77
COL9A1-202ENST00000357250 ARHGEF17Q96PE2 2063 aaPredicted RBP10.23□□□□□ -0.77
COL9A1-202ENST00000357250 IGLV1-36A0A0B4J1U3 117 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 H0Y980 276 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 HPRT1P00492 218 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 UCNP55089 124 aa10.23□□□□□ -0.77
COL9A1-202ENST00000357250 IGLV3-21P80748 117 aaPredicted RBP10.23□□□□□ -0.77
COL9A1-202ENST00000357250 FUT5Q11128 374 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms