RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 URB1O60287 2271 aaKnown RBP8.68□□□□□ -1.02
SYNE1-203ENST00000354674 A0A1W2PR80 420 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 AHRRA9YTQ3 701 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 DHHO43323 396 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 UPK3AO75631 287 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 NXPH3O95157 252 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 HLA-DQA2P01906 255 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 FCGR2AP12318 317 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 CDKN1BP46527 198 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 RND3P61587 244 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 IQCJQ1A5X6 159 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 CLEC18BQ6UXF7 455 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 OR4C5Q8NGB2 326 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 TOMM40LQ969M1 308 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 AMELYQ99218 206 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF2Q9BSG1 426 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-203ENST00000354674 LUZP4Q9P127 313 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 SLC22A20A6NK97 555 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM210A6NLX4 147 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 CST4P01036 141 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 FAM87AP0C7U9 286 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 RAC2P15153 192 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 EPHA1P21709 976 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 SLC18B1Q6NT16 456 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 FAHD2BQ6P2I3 314 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM256Q8N2U0 113 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 CPT1CQ8TCG5 803 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 VN1R17PQ8TDU5 208 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 FAHD2AQ96GK7 314 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 OR8B4Q96RC9 309 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 ACTR3CQ9C0K3 210 aaPredicted RBP8.68□□□□□ -1.02
SYNE1-203ENST00000354674 SLCO5A1Q9H2Y9 848 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 CALHM2Q9HA72 323 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF407Q9C0G0 2248 aa8.68□□□□□ -1.02
SYNE1-203ENST00000354674 ITGB1BP1O14713 200 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 SS18L1O75177 396 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 TK1P04183 234 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF823P16415 610 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 HINT1P49773 126 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 UCP2P55851 309 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 CIB3Q96Q77 187 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ABHD6Q9BV23 337 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ULBP2Q9BZM5 246 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 LHFPL6Q9Y693 200 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ZFP92A6NM28 416 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 HSD17B6O14756 317 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 NUPR1O60356 82 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 MRPL33O75394 65 aaKnown RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 IL6RP08887 468 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 GZMHP20718 246 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 CDAP32320 146 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 MRPS34P82930 218 aaKnown RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 SP6Q3SY56 376 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 FDX2Q6P4F2 183 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF709Q8N972 641 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 BOD1L1Q8NFC6 3051 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 OR52N5Q8NH56 324 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF837Q96EG3 531 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 GMPPAQ96IJ6 420 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 PRRG4Q9BZD6 226 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ARV1Q9H2C2 271 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 WFDC1Q9HC57 220 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 MRPS28Q9Y2Q9 187 aaKnown RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 TMED3Q9Y3Q3 217 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 V9GYS6 101 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ACACAQ13085 2346 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 RBFOX3A6NFN3 312 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 TACSTD2P09758 323 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 FGF8P55075 233 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 HIST1H3AP68431 136 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 RAB35Q15286 201 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 NRN1LQ496H8 165 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ACSF3Q4G176 576 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 NUFIP2Q7Z417 695 aaKnown RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 RNF133Q8WVZ7 376 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 GPR35Q9HC97 309 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ZNF71Q9NQZ8 489 aaPredicted RBP8.67□□□□□ -1.02
SYNE1-203ENST00000354674 NAGKQ9UJ70 344 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 ZFP30Q9Y2G7 519 aa8.67□□□□□ -1.02
SYNE1-203ENST00000354674 SYT7O43581 403 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 CIDEAO60543 219 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 SRSF10O75494 262 aaKnown RBP8.66□□□□□ -1.02
SYNE1-203ENST00000354674 OR5G3P0C626 314 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 MSR1P21757 451 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 MRPL49Q13405 166 aaKnown RBP8.66□□□□□ -1.02
SYNE1-203ENST00000354674 ENDOGQ14249 297 aaKnown RBP8.66□□□□□ -1.02
SYNE1-203ENST00000354674 ATP6V1FQ16864 119 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 TSPO2Q5TGU0 170 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 FAM27BQ5VT28 67 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 UNQ9370/PRO34162Q6UXP9 181 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 SMIM15Q7Z3B0 74 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 FAM220AQ7Z4H9 259 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 GBGT1Q8N5D6 347 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 AURKAIP1Q9NWT8 199 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-203ENST00000354674 WSB1Q9Y6I7 421 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 LMX1BO60663 402 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 NKX2-1P43699 371 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-203ENST00000354674 KCTD18Q6PI47 426 aaPredicted RBP8.66□□□□□ -1.02
SYNE1-203ENST00000354674 DCXRQ7Z4W1 244 aa8.66□□□□□ -1.02
SYNE1-203ENST00000354674 TMEM229BQ8NBD8 167 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms