RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 FAM234AQ9H0X4 552 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 SEPSECSQ9HD40 501 aaKnown RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 GAR1Q9NY12 217 aaKnown RBP9.13□□□□□ -0.95
RTN3-204ENST00000354497 MGAT4CQ9UBM8 478 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 GRHPRQ9UBQ7 328 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 TMED3Q9Y3Q3 217 aa9.13□□□□□ -0.95
RTN3-204ENST00000354497 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 METTL21EPA6NDL7 271 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 A8MWP6 167 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 HSPA12AO43301 675 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 SLC16A7O60669 478 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 TMEM127O75204 238 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 PPP1R3DO95685 299 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 IL18Q14116 193 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
RTN3-204ENST00000354497 SLC25A30Q5SVS4 291 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 SLC25A24Q6NUK1 477 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 ALKAL2Q6UX46 152 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 MRPL21Q7Z2W9 205 aaKnown RBP9.12□□□□□ -0.95
RTN3-204ENST00000354497 OR56B2PQ8NGI1 322 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 FAM162AQ96A26 154 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 BPIFA2Q96DR5 249 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 DDOQ99489 341 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 THAP7Q9BT49 309 aaPredicted RBP9.12□□□□□ -0.95
RTN3-204ENST00000354497 RAB18Q9NP72 206 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 COA3Q9Y2R0 106 aaPredicted RBP9.12□□□□□ -0.95
RTN3-204ENST00000354497 FBXO7Q9Y3I1 522 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 ADAM18Q9Y3Q7 739 aa9.12□□□□□ -0.95
RTN3-204ENST00000354497 F5H5K5 113 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 NDUFB3O43676 98 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 KHDRBS3O75525 346 aaKnown RBP9.11□□□□□ -0.95
RTN3-204ENST00000354497 IGF2P01344 180 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 LCATP04180 440 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 ALDOBP05062 364 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 CD2P06729 351 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 PF4V1P10720 104 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 CTLA4P16410 223 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 GLP1RP43220 463 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 GZMMP51124 257 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 CCR6P51684 374 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 MED22Q15528 200 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 LRRC75BQ2VPJ9 315 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 MESTQ5EB52 335 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 IDNKQ5T6J7 187 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 TMEM88Q6PEY1 159 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 GLB1L2Q8IW92 636 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 FAM86B1Q8N7N1 296 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 LRRC75AQ8NAA5 344 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 OR13C2Q8NGS9 318 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 TRMT10AQ8TBZ6 339 aaKnown RBP9.11□□□□□ -0.95
RTN3-204ENST00000354497 SLC7A13Q8TCU3 470 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 FAM210BQ96KR6 192 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 Q96M85 177 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 ATF6BQ99941 703 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 HDHD2Q9H0R4 259 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 GPN1Q9HCN4 374 aaPredicted RBP9.11□□□□□ -0.95
RTN3-204ENST00000354497 EXOSC4Q9NPD3 245 aaKnown RBP9.11□□□□□ -0.95
RTN3-204ENST00000354497 CLN6Q9NWW5 311 aa9.11□□□□□ -0.95
RTN3-204ENST00000354497 NOP16Q9Y3C1 178 aaKnown RBP9.11□□□□□ -0.95
RTN3-204ENST00000354497 COL7A1Q02388 2944 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 SSNA1O43805 119 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 GATBO75879 557 aaKnown RBP9.1□□□□□ -0.95
RTN3-204ENST00000354497 PPBPP02775 128 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 PF4P02776 101 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 OR1E2P47887 323 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 KRTAP10-11P60412 298 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 LSM6P62312 80 aaKnown RBP9.1□□□□□ -0.95
RTN3-204ENST00000354497 RBX1P62877 108 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 DLK1P80370 383 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 PITPNAQ00169 270 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 RBMS2Q15434 407 aaKnown RBP9.1□□□□□ -0.95
RTN3-204ENST00000354497 MEP1BQ16820 701 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 WDR38Q5JTN6 314 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 EIF5AL1Q6IS14 154 aaKnown RBP9.1□□□□□ -0.95
RTN3-204ENST00000354497 DEGS2Q6QHC5 323 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 TMEM91Q6ZNR0 172 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 SMIM15Q7Z3B0 74 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 GCSAMQ8N6F7 178 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 Q8N7P7 452 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 LY6G5BQ8NDX9 201 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 OR2G2Q8NGZ5 317 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 OR10A6Q8NH74 314 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 B9D2Q9BPU9 175 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 ZNF2Q9BSG1 426 aaPredicted RBP9.1□□□□□ -0.95
RTN3-204ENST00000354497 DCTN5Q9BTE1 182 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 SYT4Q9H2B2 425 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 REEP1Q9H902 201 aa9.1□□□□□ -0.95
RTN3-204ENST00000354497 NMNAT1Q9HAN9 279 aaPredicted RBP9.1□□□□□ -0.95
RTN3-204ENST00000354497 MRPS18AQ9NVS2 196 aaKnown RBP9.1□□□□□ -0.95
RTN3-204ENST00000354497 PRSS37A4D1T9 235 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 RNF222A6NCQ9 220 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 GGT3PA6NGU5 568 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 ADARB2-AS1A8MUL3 147 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 ZNF593O00488 134 aaPredicted RBP9.09□□□□□ -0.95
RTN3-204ENST00000354497 CHST1O43916 411 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 FABP3P05413 133 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 ADCYAP1P18509 176 aa9.09□□□□□ -0.95
RTN3-204ENST00000354497 GABRR1P24046 479 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms