RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 DNAJB11Q9UBS4 358 aa9.53□□□□□ -0.88
CDRT1-202ENST00000354433 SOX21Q9Y651 276 aaPredicted RBP9.53□□□□□ -0.88
CDRT1-202ENST00000354433 J3QT63 122 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 DVL1O14640 695 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 PDCD6O75340 191 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 TOX4O94842 621 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 LIPFP07098 398 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 ACAA1P09110 424 aaPredicted RBP9.52□□□□□ -0.89
CDRT1-202ENST00000354433 DTYMKP23919 212 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 EIF2B2P49770 351 aaKnown RBP9.52□□□□□ -0.89
CDRT1-202ENST00000354433 FOXL1Q12952 345 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 MPV17LQ2QL34 196 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 ATAD3CQ5T2N8 411 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 RUSC1-AS1Q66K80 236 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 WDR82Q6UXN9 313 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 IDO2Q6ZQW0 420 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 SLC36A1Q7Z2H8 476 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 Q8IYB0 196 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 GVQW1Q8N7I0 195 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 OR4S1Q8NGB4 309 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 OR4K15Q8NH41 348 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 CCDC107Q8WV48 283 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 TNFRSF19Q9NS68 423 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 ING3Q9NXR8 418 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 FLVCR2Q9UPI3 526 aa9.52□□□□□ -0.89
CDRT1-202ENST00000354433 M0QYG6 137 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 GEMIN2O14893 280 aaKnown RBP9.51□□□□□ -0.89
CDRT1-202ENST00000354433 IFNA6P05013 189 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 GLAP06280 429 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 RNASE1P07998 156 aaKnown RBP9.51□□□□□ -0.89
CDRT1-202ENST00000354433 HKR1P10072 659 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 BCL3P20749 454 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 FUT3P21217 361 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 CFHR2P36980 270 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 MRPS15P82914 257 aaKnown RBP9.51□□□□□ -0.89
CDRT1-202ENST00000354433 IKZF1Q13422 519 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 IL13RA2Q14627 380 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 SLC9A3R2Q15599 337 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 NKAPLQ5M9Q1 402 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 TEX36Q5VZQ5 186 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 C9orf139Q6ZV77 190 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 C6orf201Q7Z4U5 140 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 SNAPC3Q92966 411 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 SLAMF9Q96A28 289 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 CCL13Q99616 98 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 MTCH1Q9NZJ7 389 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 POLDIP2Q9Y2S7 368 aa9.51□□□□□ -0.89
CDRT1-202ENST00000354433 A0A1B0GW55 424 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 NKX6-3A6NJ46 265 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 HOXA3O43365 443 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 LHBP01229 141 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4L2P0CJ85 424 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4L3P0CJ86 424 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4L4P0CJ87 422 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4L5P0CJ88 424 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4L6P0CJ89 424 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4L7P0CJ90 424 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 MUC1P15941 1255 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 AMY2BP19961 511 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 HRH1P35367 487 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 NPBWR2P48146 333 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 ARF6P62330 175 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 CDK10Q15131 360 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SRSF7Q16629 238 aaKnown RBP eCLIP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DEFB112Q30KQ8 113 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 PIGYQ3MUY2 71 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 OR52W1Q6IF63 320 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 HAGHLQ6PII5 290 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4L9Q6RFH8 374 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 RTN4RL2Q86UN3 420 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 TMEM17Q86X19 198 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 C11orf53Q8IXP5 236 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 PDZD9Q8IXQ8 264 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 FAM216BQ8N7L0 139 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 BEST4Q8NFU0 473 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 OR5H2Q8NGV7 314 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 CMSS1Q9BQ75 279 aaKnown RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 IFT22Q9H7X7 185 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SPACA1Q9HBV2 294 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 RCC2Q9P258 522 aaKnown RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 ONECUT1Q9UBC0 465 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 DUX4Q9UBX2 424 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 TMEM82A0PJX8 343 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 POM121CA8CG34 1229 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SRRM5B3KS81 715 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 NDUFB3O43676 98 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SYNGR1O43759 233 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 CREBL2O60519 120 aaPredicted RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 FCER2P06734 321 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SULT1A3P0DMM9 295 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SULT1A4P0DMN0 295 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SNU13P55769 128 aaKnown RBP9.5□□□□□ -0.89
CDRT1-202ENST00000354433 CBX3Q13185 183 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 GRK1Q15835 563 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 LRRC10Q5BKY1 277 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 ZNF626Q68DY1 528 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 FGFRL1Q8N441 504 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 SCCPDHQ8NBX0 429 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 OR5AP2Q8NGF4 316 aa9.5□□□□□ -0.89
CDRT1-202ENST00000354433 OR5T2Q8NGG2 359 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms