RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 KIR2DS1A0A191URI9 304 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 LINC00862A6NCI5 91 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 ARPC5O15511 151 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 NOS1APO75052 506 aaPredicted RBP6.89□□□□□ -1.31
CD44-205ENST00000352818 B3GALNT1O75752 331 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 OR2F2O95006 317 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 DIRAS3O95661 229 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 CTXN2P0C2S0 81 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 CECR9P0C854 216 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 PGA5P0DJD9 388 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 LYL1P12980 280 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 PRKACAP17612 351 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 CA6P23280 308 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 KIR2DS4P43632 304 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 RND3P61587 244 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 PSG7Q13046 419 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 OR2F1Q13607 317 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 EXOSC2Q13868 293 aaKnown RBP6.89□□□□□ -1.31
CD44-205ENST00000352818 RBM39Q14498 530 aaKnown RBP6.89□□□□□ -1.31
CD44-205ENST00000352818 KIR2DS1Q14954 304 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 TIMM23BQ5SRD1 257 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 SPATA46Q5T0L3 261 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 ZNF880Q6PDB4 577 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 SHISA2Q6UWI4 295 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 TMUB2Q71RG4 321 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 MOB1BQ7L9L4 216 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 WDR86Q86TI4 376 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 SGPP2Q8IWX5 399 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 SLC38A6Q8IZM9 456 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 FAM185AQ8N0U4 392 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 KCNRGQ8N5I3 272 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 ZNF610Q8N9Z0 462 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 SPERTQ8NA61 448 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 BHLHE23Q8NDY6 225 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 OR8G5Q8NG78 346 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 OR1J1Q8NGS3 322 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 CASTOR1Q8WTX7 329 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 FAM216AQ8WUB2 273 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 DYRK2Q92630 601 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 GALNT14Q96FL9 552 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 VRK1Q99986 396 aaPredicted RBP6.89□□□□□ -1.31
CD44-205ENST00000352818 NRIP2Q9BQI9 281 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 RSRP1Q9BUV0 290 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 DPCDQ9BVM2 203 aaPredicted RBP6.89□□□□□ -1.31
CD44-205ENST00000352818 OPN3Q9H1Y3 402 aaPredicted RBP6.89□□□□□ -1.31
CD44-205ENST00000352818 HES4Q9HCC6 221 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 Q9N2K0 584 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 C1orf123Q9NWV4 160 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 UBQLN2Q9UHD9 624 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 PURGQ9UJV8 347 aaKnown RBP6.89□□□□□ -1.31
CD44-205ENST00000352818 TNFSF18Q9UNG2 199 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 MAB21L2Q9Y586 359 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 AUP1Q9Y679 476 aa6.89□□□□□ -1.31
CD44-205ENST00000352818 DNAH9Q9NYC9 4486 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 IGHV1-18A0A0C4DH31 117 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 RPS10-NUDT3A0A1W2PQS6 291 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 A0A1W2PR80 420 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 NPIPB11E5RHQ5 1161 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 F8VVB4 439 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 F8VWA3 439 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 CCSO14618 274 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 TUSC2O75896 110 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ZNF728P0DKX0 622 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 GLRA1P23415 457 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 IL32P24001 234 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 PSMB6P28072 239 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 SERPINF1P36955 418 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ERVS71-1P61550 626 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 UBA52P62987 128 aaKnown RBP6.88□□□□□ -1.31
CD44-205ENST00000352818 MZT1Q08AG7 82 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 BAMBIQ13145 260 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 IL15RAQ13261 267 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ZNF146Q15072 292 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 OR8G1Q15617 311 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ANKRD55Q3KP44 614 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ZNF718Q3SXZ3 478 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 SPIN3Q5JUX0 258 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 CLLU1Q5K131 121 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 Q6P435 159 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ZNF546Q86UE3 836 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 GAPTQ8N292 157 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 LRTM2Q8N967 370 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 CCDC71LQ8N9Z2 235 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 SUMF2Q8NBJ7 301 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 POC1AQ8NBT0 407 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 SCCPDHQ8NBX0 429 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 MRPL30Q8TCC3 161 aaKnown RBP6.88□□□□□ -1.31
CD44-205ENST00000352818 KLF14Q8TD94 323 aaPredicted RBP6.88□□□□□ -1.31
CD44-205ENST00000352818 PPP1R1CQ8WVI7 109 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 NEUROG1Q92886 237 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 C2orf50Q96LR7 162 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 USB1Q9BQ65 265 aaKnown RBP6.88□□□□□ -1.31
CD44-205ENST00000352818 CABLES2Q9BTV7 478 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 SUCNR1Q9BXA5 334 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 MFFQ9GZY8 342 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 ARL6Q9H0F7 186 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 OR51B6Q9H340 312 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 PIGMQ9H3S5 423 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 NAA60Q9H7X0 242 aa6.88□□□□□ -1.31
CD44-205ENST00000352818 CHMP1AQ9HD42 196 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms