RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 UTS2O95399 124 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 NBEAP1P0C6P0 100 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 DNM1P34Q6PK57 102 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 PRR22Q8IZ63 422 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 SERGEFQ9UGK8 458 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 CNTRLQ7Z7A1 2325 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 C5orf63A6NC05 138 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 MT-ATP6P00846 226 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 EGR1P18146 543 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 HERV-K104P61576 105 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 HYAL1Q12794 435 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 SNAI3Q3KNW1 292 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 Q5PR19 223 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 PRR27Q6MZM9 219 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 CNKSR3Q6P9H4 555 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 FLVCR1-AS1Q8TAF5 88 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 ABHD3Q8WU67 409 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 TNFRSF14Q92956 283 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 PIGTQ969N2 578 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 ZFYVE21Q9BQ24 234 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 TIMM29Q9BSF4 260 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 IGKV1D-33P01593 117 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 IGKV1-33P01594 117 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 DUSP3P51452 185 aaPredicted RBP11.38□□□□□ -0.59
IFT88-202ENST00000351808 TLE3Q04726 772 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 RPP25LQ8N5L8 163 aaKnown RBP11.38□□□□□ -0.59
IFT88-202ENST00000351808 DDIT4LQ96D03 193 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 SMIM12Q96EX1 92 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 EMC6Q9BV81 110 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 MEGF9Q9H1U4 602 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 MRPS16Q9Y3D3 137 aaKnown RBP11.38□□□□□ -0.59
IFT88-202ENST00000351808 ODAMA1E959 279 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 OR5B21A6NL26 309 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 CEACAM5P06731 702 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 GPX1P07203 203 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 C1QTNF9P0C862 333 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 PGCP20142 388 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 BMI1P35226 326 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 YPEL3P61236 119 aaPredicted RBP11.38□□□□□ -0.59
IFT88-202ENST00000351808 RHOGP84095 191 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 ARL16Q0P5N6 197 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 HNRNPA1L2Q32P51 320 aaKnown RBP11.38□□□□□ -0.59
IFT88-202ENST00000351808 SPIN3Q5JUX0 258 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 SYT13Q7L8C5 426 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 TBC1D26Q86UD7 250 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 SFTPA1Q8IWL2 248 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 POLR1DQ9Y2S0 133 aa11.38□□□□□ -0.59
IFT88-202ENST00000351808 TBL2Q9Y4P3 447 aaKnown RBP11.38□□□□□ -0.59
IFT88-202ENST00000351808 NPIPA5E9PKD4 350 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 CISD3P0C7P0 127 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 CTSEP14091 401 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 GNRHRP30968 328 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 OR4A47Q6IF82 309 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 SLC25A22Q9H936 323 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 NRN1Q9NPD7 142 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 TBC1D29Q9UFV1 150 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 NPIPA1Q9UND3 350 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 PGPEP1LA6NFU8 196 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 B4DGG1 531 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 E9PLN8 166 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 J3QW42 95 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 K7ERU9 68 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 HCRTR1O43613 425 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 TIAF1O95411 115 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 IGHMP01871 453 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 FAHP16930 419 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 NPPCP23582 126 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 CDC34P49427 236 aaPredicted RBP11.37□□□□□ -0.59
IFT88-202ENST00000351808 SRPXP78539 464 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 FOXL1Q12952 345 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 ASB10Q8WXI3 467 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
IFT88-202ENST00000351808 TMEM56Q96MV1 263 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 DGAT2Q96PD7 388 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 PHPT1Q9NRX4 125 aaPredicted RBP11.37□□□□□ -0.59
IFT88-202ENST00000351808 TMEM56-RWDD3S4R434 201 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 CPAMD8Q8IZJ3 1885 aa11.37□□□□□ -0.59
IFT88-202ENST00000351808 TMED7-TICAM2A0A0A6YYA0 188 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 IGHV1-69-2A0A0G2JMI3 117 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 IGLC7A0M8Q6 106 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 RNF212BA8MTL3 300 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 CCL16O15467 120 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 ANGPTL7O43827 346 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 VAMP5O95183 116 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 VENTXO95231 258 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 DLX2Q07687 328 aaPredicted RBP11.36□□□□□ -0.59
IFT88-202ENST00000351808 NMSQ5H8A3 153 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 ZNF295-AS1Q8N0V1 137 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 OR56B2PQ8NGI1 322 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 ABHD14BQ96IU4 210 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 Q96M66 194 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 UHRF2Q96PU4 802 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
IFT88-202ENST00000351808 MRPL18Q9H0U6 180 aaKnown RBP11.36□□□□□ -0.59
IFT88-202ENST00000351808 PAGE4O60829 102 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 ZNF133P52736 654 aaPredicted RBP11.36□□□□□ -0.59
IFT88-202ENST00000351808 SERF2P84101 59 aa11.36□□□□□ -0.59
IFT88-202ENST00000351808 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms