RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 EIF3IQ13347 325 aaKnown RBP16■□□□□ 0.15
SCARF1-202ENST00000348987 TMEM241Q24JQ0 296 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 BSXQ3C1V8 233 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF573Q86YE8 665 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 PLPPR1Q8TBJ4 325 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 IGKV1-27A0A075B6S5 117 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 IGHV5-10-1A0A0J9YXX1 117 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 G3V3Y1 287 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 IRF2P14316 349 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 MSX1P28360 303 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 MRPS11P82912 194 aaKnown RBP16■□□□□ 0.15
SCARF1-202ENST00000348987 HIST3H3Q16695 136 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 KIAA2026Q5HYC2 2103 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 ACTL10Q5JWF8 245 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 DMRTA1Q5VZB9 504 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 GBGT1Q8N5D6 347 aa16■□□□□ 0.15
SCARF1-202ENST00000348987 RPUSD4Q96CM3 377 aaKnown RBP16■□□□□ 0.15
SCARF1-202ENST00000348987 SPACA9Q96E40 222 aaPredicted RBP16■□□□□ 0.15
SCARF1-202ENST00000348987 IGLV3-32A0A0A0MS00 114 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 PDGFBP01127 241 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-202ENST00000348987 ANKRD39Q53RE8 183 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 ARSJQ5FYB0 599 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-202ENST00000348987 OXGR1Q96P68 337 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 DIRC2Q96SL1 478 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 NAGKQ9UJ70 344 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 RARRES3Q9UL19 164 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 LY6G6EA0A0G2JKS1 128 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 LRRC3CA6NJW4 275 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 RPL23P62829 140 aaKnown RBP15.99■□□□□ 0.15
SCARF1-202ENST00000348987 NMSQ5H8A3 153 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 PRR18Q8N4B5 295 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 DTD1Q8TEA8 209 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 DEFB126Q9BYW3 111 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 SLC7A10Q9NS82 523 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 CHCHD2Q9Y6H1 151 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-202ENST00000348987 U3KQA8 63 aa15.99■□□□□ 0.15
SCARF1-202ENST00000348987 CHD3Q12873 2000 aaKnown RBP15.99■□□□□ 0.15
SCARF1-202ENST00000348987 A0A0U1RQV5 110 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 A0A1B0GUS0 222 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 DKK1O94907 266 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 PLA2G5P39877 138 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 RSPO1Q2MKA7 263 aaPredicted RBP15.98■□□□□ 0.15
SCARF1-202ENST00000348987 MBD3L1Q8WWY6 194 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF385AQ96PM9 386 aaKnown RBP15.98■□□□□ 0.15
SCARF1-202ENST00000348987 OCIAD1Q9NX40 245 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 WNT16Q9UBV4 365 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 RNF115Q9Y4L5 304 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF705FA8MVS1 300 aaPredicted RBP15.98■□□□□ 0.15
SCARF1-202ENST00000348987 M0QZK8 103 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 TP53I11O14683 189 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 GGCTO75223 188 aaKnown RBP15.98■□□□□ 0.15
SCARF1-202ENST00000348987 HPRT1P00492 218 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF705DP0CH99 300 aaPredicted RBP15.98■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF705BP0CI00 300 aaPredicted RBP15.98■□□□□ 0.15
SCARF1-202ENST00000348987 EDN3P14138 238 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 CYP2G1PQ6ZSU1 146 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 MRGPRGQ86SM5 289 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 UCN2Q96RP3 112 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 PRO3102Q9H379 93 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 AQP7P3A6NL99 342 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF737O75373 536 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 LINC00614P0C842 121 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 CD33P20138 364 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF818PQ6ZRF7 136 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 OR2AE1Q8NHA4 323 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 ZNF837Q96EG3 531 aaPredicted RBP15.98■□□□□ 0.15
SCARF1-202ENST00000348987 CCDC74BQ96LY2 380 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 SIT1Q9Y3P8 196 aa15.98■□□□□ 0.15
SCARF1-202ENST00000348987 HRASP01112 189 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 CRYABP02511 175 aaKnown RBP15.97■□□□□ 0.15
SCARF1-202ENST00000348987 CTSSP25774 331 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 CNN1P51911 297 aaKnown RBP15.97■□□□□ 0.15
SCARF1-202ENST00000348987 SNAI3Q3KNW1 292 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 TMEM256Q8N2U0 113 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 SCGB1C1Q8TD33 95 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 ABHD14BQ96IU4 210 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 TBX15Q96SF7 602 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 PLA2G3Q9NZ20 509 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 TAAR3PQ9P1P4 343 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 VDAC1P21796 283 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 OR10J1P30954 320 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 NPBWR2P48146 333 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 RPS18P62269 152 aaKnown RBP15.97■□□□□ 0.15
SCARF1-202ENST00000348987 ACOT6Q3I5F7 207 aaPredicted RBP15.97■□□□□ 0.15
SCARF1-202ENST00000348987 BATF2Q8N1L9 274 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 GAPTQ8N292 157 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 ARL6IP6Q8N6S5 226 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 ADPRHL1Q8NDY3 354 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 SDSLQ96GA7 329 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 OR6C3Q9NZP0 311 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 ST3GAL6Q9Y274 331 aa15.97■□□□□ 0.15
SCARF1-202ENST00000348987 PTRH2Q9Y3E5 179 aaKnown RBP15.97■□□□□ 0.15
SCARF1-202ENST00000348987 IGKV1-12A0A0C4DH73 117 aa15.96■□□□□ 0.15
SCARF1-202ENST00000348987 GALR2O43603 387 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-202ENST00000348987 NUPR1O60356 82 aa15.96■□□□□ 0.15
SCARF1-202ENST00000348987 IGKV1D-12P01611 117 aa15.96■□□□□ 0.15
SCARF1-202ENST00000348987 SELEP16581 610 aa15.96■□□□□ 0.15
SCARF1-202ENST00000348987 BATFQ16520 125 aa15.96■□□□□ 0.15
SCARF1-202ENST00000348987 KCNMB1Q16558 191 aa15.96■□□□□ 0.15
SCARF1-202ENST00000348987 OR2T10Q8NGZ9 312 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms