RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 SEPSECSQ9HD40 501 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 ASCC3Q8N3C0 2202 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 IGLV3-16A0A075B6K0 115 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 PSG1P11464 419 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 KLK2P20151 261 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 SUMO3P55854 103 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 UCP3P55916 312 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 LSM6P62312 80 aaKnown RBP9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 LOXL4Q96JB6 756 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 CLEC18AA5D8T8 446 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 RER1O15258 196 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 PATE4P0C8F1 98 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 COL10A1Q03692 680 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 C3AR1Q16581 482 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 SSX8Q7RTT4 187 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 CLEC18CQ8NCF0 446 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 ZDHHC16Q969W1 377 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 PPIL1Q9Y3C6 166 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 BCORQ6W2J9 1755 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 PATE3B3GLJ2 98 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 GALR2O43603 387 aaPredicted RBP9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 SCAND1P57086 179 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 MMDQ15546 238 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 NEU1Q99519 415 aa9.76□□□□□ -0.85
SMARCE1-202ENST00000348513 A0A0B4J2E0 115 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 A0A1B0GX12 115 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 H0Y980 276 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 RHBDD2Q6NTF9 364 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 MOB3BQ86TA1 216 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 CT55Q8WUE5 264 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 RCC1LQ96I51 464 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 SEMA5BQ9P283 1151 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 TMEM238LA0A1B0GVL6 79 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 DPRXA6NFQ7 191 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 A6NJY4 79 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 NCBP2LA6PVI3 153 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 DEFB108AA8MXU0 73 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 SLAQ13239 276 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 INSL4Q14641 139 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 Q8NFD4 153 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 PRSS3P2Q8NHM4 247 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF385AQ96PM9 386 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 MMP25Q9NPA2 562 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 DNAJB12Q9NXW2 375 aaKnown RBP9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 KCNE1BA0A087WTH5 132 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 LIPFP07098 398 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 CCL4P13236 92 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 CA6P23280 308 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 PMP22Q01453 160 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 MRGPRGQ86SM5 289 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 SDHCQ99643 169 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 CSTL1Q9H114 145 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 KLF2Q9Y5W3 355 aaPredicted RBP9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 ARAP2Q8WZ64 1704 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 UBE2L5PA0A1B0GUS4 154 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 OR4A8P0C604 315 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 PRDX4Q13162 271 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 SLC25A42Q86VD7 318 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 OR4D9Q8NGE8 314 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 OR5C1Q8NGR4 320 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 COMMD5Q9GZQ3 224 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 CCL27Q9Y4X3 112 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 LTBP4Q8N2S1 1624 aa9.75□□□□□ -0.85
SMARCE1-202ENST00000348513 M0QZ24 198 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 LPAR6P43657 344 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 TAS2R45P59539 299 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 SSPNQ14714 243 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 FBXL14Q8N1E6 418 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 OR10D3Q8NH80 312 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 APOBEC3DQ96AK3 386 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 GABRG3Q99928 467 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 CRISPLD2Q9H0B8 497 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 SS18L2Q9UHA2 77 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 NKX2-2O95096 273 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 NMUP48645 174 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 WDFY1Q8IWB7 410 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 OTOSQ8NHW6 89 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 SMCHD1A6NHR9 2005 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 A0A1B0GTH9 108 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 H3BUT2 72 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 LMX1BO60663 402 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 ONECUT2O95948 504 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 UMODP07911 640 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 ERGP11308 486 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 FUT6P51993 359 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 OR2M7Q8NG81 312 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 MRPL18Q9H0U6 180 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 TMEM262E9PQX1 116 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms