RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 STAG3L3P0CL85 134 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 CKS2P33552 79 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 DHRS4L2Q6PKH6 230 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 MOGAT3Q86VF5 341 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 ZG16BQ96DA0 208 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 TMEM204Q9BSN7 226 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 WNT5BQ9H1J7 359 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 TDGF1P13385 188 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 LY6EQ16553 131 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 FAHD1Q6P587 224 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 PTOV1Q86YD1 416 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 VGLL1Q99990 258 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 KLK11Q9UBX7 282 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 LRP5O75197 1615 aa10.42□□□□□ -0.74
TRAF3-201ENST00000347662 C1QBP02746 253 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 TFAP2AP05549 437 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 GABRB1P18505 474 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 EIF3IQ13347 325 aaKnown RBP10.41□□□□□ -0.74
TRAF3-201ENST00000347662 ARAP2Q8WZ64 1704 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 SLC25A20O43772 301 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 FCGR3AP08637 254 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 ZNF117Q03924 483 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 PRSS41Q7RTY9 318 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 ARHGAP5-AS1Q96IT6 56 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 OR2A5Q96R48 311 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 PCNX1Q96RV3 2341 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 HMGN4O00479 90 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 OR5AC1P0C628 307 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 RPS4XP62701 263 aaKnown RBP10.41□□□□□ -0.74
TRAF3-201ENST00000347662 HARBI1Q96MB7 349 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 FUNDC1Q8IVP5 155 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
TRAF3-201ENST00000347662 UBE2DNLQ8IWF7 75 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 SSC4DQ8WTU2 575 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 LINC00470Q9BZP3 86 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 SPNS1Q9H2V7 528 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 HIGD1AQ9Y241 93 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 TAF1LQ8IZX4 1826 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 CCL4P13236 92 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 DDOSTP39656 456 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 TMEM33P57088 247 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 C11orf87Q6NUJ2 197 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 ZNF774Q6NX45 483 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 MAVSQ7Z434 540 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 OR2T10Q8NGZ9 312 aa10.41□□□□□ -0.74
TRAF3-201ENST00000347662 SNURFLB1AK76 121 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 SLC25A40Q8TBP6 338 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 NRG4Q8WWG1 115 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 ANAPC16Q96DE5 110 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 RHNO1Q9BSD3 238 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 RREB1Q92766 1687 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 KRTCAP3Q53RY4 240 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 C2orf83Q53S99 150 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 LHFPL5Q8TAF8 219 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 SLC35B3Q9H1N7 401 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 CLN8Q9UBY8 286 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 LRP12Q9Y561 859 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 HMX2A2RU54 273 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 DLK1P80370 383 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 ACVR1Q04771 509 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 ZBTB37Q5TC79 503 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 LINC00615Q96LM1 132 aaPredicted RBP10.4□□□□□ -0.74
TRAF3-201ENST00000347662 DUSP21Q9H596 190 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 COL11A2P13942 1736 aaPredicted RBP10.4□□□□□ -0.74
TRAF3-201ENST00000347662 IFITM5A6NNB3 132 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 NPBWR2P48146 333 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 PWWP2BQ6NUJ5 590 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 DNASE2BQ8WZ79 361 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 MRGPRX3Q96LB0 322 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 PRELID3AQ96N28 172 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
TRAF3-201ENST00000347662 DOCK9Q9BZ29 2069 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 A0A1W2PS18 150 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 UPK1AO00322 258 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 PAGE4O60829 102 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 GPX5O75715 221 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 SPINK14Q6IE38 97 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 SLC25A42Q86VD7 318 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 TMEM229BQ8NBD8 167 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 COL25A1Q9BXS0 654 aaPredicted RBP10.4□□□□□ -0.74
TRAF3-201ENST00000347662 TMEM38AQ9H6F2 299 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 CACNA1DQ01668 2161 aa10.4□□□□□ -0.74
TRAF3-201ENST00000347662 KBTBD11O94819 623 aa10.4□□□□□ -0.75
TRAF3-201ENST00000347662 DUSP8Q13202 625 aa10.4□□□□□ -0.75
TRAF3-201ENST00000347662 HDHD3Q9BSH5 251 aaPredicted RBP10.4□□□□□ -0.75
TRAF3-201ENST00000347662 FUT9Q9Y231 359 aa10.4□□□□□ -0.75
TRAF3-201ENST00000347662 C7orf71A4D174 169 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 KISS1Q15726 138 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 FAM169BQ8N8A8 192 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 SMIM19Q96E16 107 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 Q9N2K0 584 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 AURKAIP1Q9NWT8 199 aaPredicted RBP10.39□□□□□ -0.75
TRAF3-201ENST00000347662 OR2W1Q9Y3N9 320 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 ARF6P62330 175 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 AANATQ16613 207 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 CLRN3Q8NCR9 226 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 PSMG3Q9BT73 122 aaPredicted RBP10.39□□□□□ -0.75
TRAF3-201ENST00000347662 ZNF665Q9H7R5 613 aa10.39□□□□□ -0.75
TRAF3-201ENST00000347662 CMC2Q9NRP2 79 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms