RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TXNL1O43396 289 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 GALR2O43603 387 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-201ENST00000347613 PSPNO60542 156 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 RAMP3O60896 148 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 IFNA21P01568 189 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 CD55P08174 381 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 ACAA1P09110 424 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-201ENST00000347613 NR2C1P13056 603 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 ID3Q02535 119 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 CCDC36Q8IYA8 594 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 FAM24BQ8N5W8 94 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 TPRX1Q8N7U7 411 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 FAM213BQ8TBF2 198 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 SUCNR1Q9BXA5 334 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 OR2J1Q9GZK6 312 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 RPS10P5Q9NQ39 176 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 SH3BGRL2Q9UJC5 107 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 KCNIP3Q9Y2W7 256 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF175Q9Y473 711 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 HRNRQ86YZ3 2850 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-201ENST00000347613 SIRPB1O00241 398 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 SP1P08047 785 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 SP9P0CG40 484 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 MPV17P39210 176 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 DUSP3P51452 185 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-201ENST00000347613 CDPF1Q6NVV7 123 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 DPPA2Q7Z7J5 298 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 LGI3Q8N145 548 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 RSG1Q9BU20 258 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 LINC00470Q9BZP3 86 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 EGLN1Q9GZT9 426 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 EIF5A2Q9GZV4 153 aaKnown RBP5.11□□□□□ -1.59
CLCN3-201ENST00000347613 HEATR1Q9H583 2144 aaKnown RBP5.11□□□□□ -1.59
CLCN3-201ENST00000347613 ATP23Q9Y6H3 246 aa5.11□□□□□ -1.59
CLCN3-201ENST00000347613 ZFHX2Q9C0A1 2572 aaPredicted RBP5.11□□□□□ -1.59
CLCN3-201ENST00000347613 CUL9Q8IWT3 2517 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 OTOGLQ3ZCN5 2332 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF98A6NK75 572 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 CDIPTO14735 213 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 PITX3O75364 302 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 LYZL6O75951 148 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 SNAPINO95295 136 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 SLC34A2O95436 690 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 HEXAP06865 529 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 SEC11BP0C7V7 166 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 AKR1D1P51857 326 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 PEA15Q15121 130 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 MSMPQ1L6U9 139 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 MRPL21Q7Z2W9 205 aaKnown RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 C11orf53Q8IXP5 236 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 GTF3AQ92664 365 aaKnown RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 BCL2L2Q92843 193 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 DCTN5Q9BTE1 182 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 PPP1R3CQ9UQK1 317 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 A0A1B0GWJ7 208 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 IFITM10A6NMD0 228 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 H7C2Y5 167 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 CLN5O75503 358 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 TSPAN15O95858 294 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 PET100P0DJ07 73 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 CD46P15529 392 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF14P17017 642 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 IGHV1-2P23083 117 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 UCP1P25874 307 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 PCBD1P61457 104 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 RND3P61587 244 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 RPL30P62888 115 aaKnown RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 FLI1Q01543 452 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 FOXF2Q12947 444 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 GNMTQ14749 295 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 PLA2G2CQ5R387 149 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF880Q6PDB4 577 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 SCCPDHQ8NBX0 429 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 APH1AQ96BI3 265 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 RGCCQ9H4X1 137 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 PLEKHA2Q9HB19 425 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 LYRM2Q9NU23 88 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 MLXQ9UH92 298 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 RNF150Q9ULK6 438 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 UBE2J1Q9Y385 318 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 WRBO00258 174 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 YKT6O15498 198 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 NKX2-8O15522 239 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 MLNRO43193 412 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 TNFSF15O95150 251 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 OR2H2O95918 312 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 CXCL1P09341 107 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 IAPPP10997 89 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 NKX2-1P43699 371 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 CAMLGP49069 296 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 HERV-K104P61576 105 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 CLN3Q13286 438 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 FAM189A2Q15884 450 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 OR2B11Q5JQS5 317 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 ABHD17BQ5VST6 288 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 Q6ZS49 121 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 C1orf229Q6ZS94 237 aaPredicted RBP5.1□□□□□ -1.59
CLCN3-201ENST00000347613 SLC16A13Q7RTY0 426 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 ZNF695Q8IW36 515 aa5.1□□□□□ -1.59
CLCN3-201ENST00000347613 OR2G3Q8NGZ4 309 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms