RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 ZNF81P51508 661 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 IL13RA2Q14627 380 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 KRBOX4Q5JUW0 171 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 Q6P435 159 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 DHRS11Q6UWP2 260 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 CLEC18BQ6UXF7 455 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 UNQ6126/PRO20091Q6UXV3 157 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF826PQ6ZT77 177 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 LRP11Q86VZ4 500 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 DMBX1Q8NFW5 382 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 SEC22AQ96IW7 307 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 LURAP1Q96LR2 239 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 NEU1Q99519 415 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 PLK3Q9H4B4 646 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 TREM2Q9NZC2 230 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF835Q9Y2P0 537 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 POLEQ07864 2286 aa7.8□□□□□ -1.16
ATG4A-202ENST00000345734 CACNA1DQ01668 2161 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 TRAV14DV4A0A0A6YYC5 116 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 PGA5P0DJD9 388 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 NFYAP23511 347 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 GCH1P30793 250 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 CCKARP32238 428 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 FXYD4P59646 89 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 ERVK11-1P61568 191 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 SORDQ00796 357 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 ANKRD55Q3KP44 614 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 PRAMEF6Q5VXH4 476 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 MBNL2Q5VZF2 373 aaKnown RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 LINC00596Q86U02 117 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 C11orf53Q8IXP5 236 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 TOMM40LQ969M1 308 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 MUCL1Q96DR8 90 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 NRIP2Q9BQI9 281 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 DPCDQ9BVM2 203 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 FXYD6Q9H0Q3 95 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 Q9N2K0 584 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 FXYD6-FXYD2A0A087WZ82 144 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM210A6NLX4 147 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 SIRPB1O00241 398 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 DEGS1O15121 323 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 NXPH2O95156 264 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 SCTP09683 121 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF44P15621 663 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 SURF2Q15527 256 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 RGS7BPQ6MZT1 257 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 STPG2Q8N412 459 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 RELL2Q8NC24 303 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 MRPL30Q8TCC3 161 aaKnown RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 ELMOD3Q96FG2 381 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 CXXC4Q9H2H0 198 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 SEBOXQ9HB31 216 aaPredicted RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 DECR2Q9NUI1 292 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 C14orf166Q9Y224 244 aaKnown RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 POLDIP2Q9Y2S7 368 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 CHTOPQ9Y3Y2 248 aaKnown RBP7.79□□□□□ -1.16
ATG4A-202ENST00000345734 ITPR1Q14643 2758 aa7.79□□□□□ -1.16
ATG4A-202ENST00000345734 A0A1B0GW55 424 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 WNT9BO14905 357 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 ARPC5O15511 151 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 RGS11O94810 467 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 MPC2O95563 127 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 OR2H2O95918 312 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 CTSDP07339 412 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-202ENST00000345734 DUX4L2P0CJ85 424 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 DUX4L3P0CJ86 424 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 DUX4L4P0CJ87 422 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 DUX4L5P0CJ88 424 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 DUX4L6P0CJ89 424 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 DUX4L7P0CJ90 424 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 TMEM11P17152 192 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 HLA-GP17693 338 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 AADACP22760 399 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 TUBG1P23258 451 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 CEBPDP49716 269 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-202ENST00000345734 UCNP55089 124 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SEC61A1P61619 476 aaKnown RBP7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SSX3Q99909 188 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SPACA1Q9HBV2 294 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 TUBG2Q9NRH3 451 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 C19orf12Q9NSK7 152 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 DUX4Q9UBX2 424 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 TUBD1Q9UJT1 453 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 A6NLC8 198 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SLC33A1O00400 549 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-202ENST00000345734 CD8AP01732 235 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 CRYAAP02489 173 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 RLN2P04090 185 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 ZNF728P0DKX0 622 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SERPINF1P36955 418 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 NKX6-1P78426 367 aaPredicted RBP7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SRSF4Q08170 494 aaKnown RBP7.78□□□□□ -1.16
ATG4A-202ENST00000345734 HERPUD1Q15011 391 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 LRRC37A5PQ49AS3 106 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 SAPCD1Q5SSQ6 148 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 LPCAT3Q6P1A2 487 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 ETV3LQ6ZN32 361 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 Q6ZS49 121 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 MRGPRGQ86SM5 289 aa7.78□□□□□ -1.16
ATG4A-202ENST00000345734 Q8IYB0 196 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms