RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 PHYHIPQ92561 330 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 UFD1Q92890 307 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 TOMM40LQ969M1 308 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 RPEQ96AT9 228 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 RBM14Q96PK6 669 aaKnown RBP11.51□□□□□ -0.57
HMGN3-202ENST00000344726 GFI1Q99684 422 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 VCX3BQ9H321 246 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 SPACA1Q9HBV2 294 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 ETAA1Q9NY74 926 aa11.51□□□□□ -0.57
HMGN3-202ENST00000344726 AMMECR1Q9Y4X0 333 aaPredicted RBP11.51□□□□□ -0.57
HMGN3-202ENST00000344726 UBE2QL1A1L167 161 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 ORC5O43913 435 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 OR2F2O95006 317 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 MPIG6BO95866 241 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 HSMCR30P0CW71 290 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 RCC1P18754 421 aaPredicted RBP11.5□□□□□ -0.57
HMGN3-202ENST00000344726 FUT3P21217 361 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 MNDAP41218 407 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 ARHGDIBP52566 201 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 MADCAM1Q13477 382 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 HSD17B12Q53GQ0 312 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 DRAM1Q8N682 238 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 DTX3Q8N9I9 347 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 OR52M1Q8NGK5 317 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 OR56B4Q8NH76 319 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 CNBD2Q96M20 576 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 CCDC90BQ9GZT6 254 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 GFOD1Q9NXC2 390 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 GHRLQ9UBU3 117 aa11.5□□□□□ -0.57
HMGN3-202ENST00000344726 G3V4G9 280 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 SDCBPO00560 298 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-202ENST00000344726 SLC22A1O15245 554 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 SLC31A2O15432 143 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 ATP6V1G2O95670 118 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 SNRNP70P08621 437 aaKnown RBP11.49□□□□□ -0.57
HMGN3-202ENST00000344726 CPEP16870 476 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 VDAC2P45880 294 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-202ENST00000344726 HSPA13P48723 471 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 QRFPP83859 136 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 MLLT11Q13015 90 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-202ENST00000344726 UNC119Q13432 240 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 ABCA11PQ4W5N1 156 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 ARSJQ5FYB0 599 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-202ENST00000344726 GLT8D1Q68CQ7 371 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 LINC00311Q8N616 119 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 OR10X1Q8NGY0 326 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 OR1L1Q8NH94 360 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 CITED2Q99967 270 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-202ENST00000344726 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 TRAPPC2LQ9UL33 140 aa11.49□□□□□ -0.57
HMGN3-202ENST00000344726 PDCD6O75340 191 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 FBXO24O75426 580 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 HBZP02008 142 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 OPN1MWP04001 364 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 GLAP06280 429 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 LPLP06858 475 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 UBBP0CG47 229 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 OPN1MW2P0DN77 364 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 OPN1MW3P0DN78 364 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 CHATP28329 748 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 HTR2CP28335 458 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 REG1BP48304 166 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 RPS27AP62979 156 aaKnown RBP11.48□□□□□ -0.57
HMGN3-202ENST00000344726 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 THNSL2Q86YJ6 484 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 ZNF439Q8NDP4 499 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 MRPL30Q8TCC3 161 aaKnown RBP11.48□□□□□ -0.57
HMGN3-202ENST00000344726 MGLLQ99685 303 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 SULT4A1Q9BR01 284 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 NICN1Q9BSH3 213 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 CST11Q9H112 138 aa11.48□□□□□ -0.57
HMGN3-202ENST00000344726 A0A0A6YYD4 124 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 TMEM14DPA8MWL7 114 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 H3BUI4 141 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 HSD17B6O14756 317 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 RAB7AP51149 207 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 ZNF134P52741 427 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 FABP5Q01469 135 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 ZNF816Q0VGE8 651 aaPredicted RBP11.47□□□□□ -0.57
HMGN3-202ENST00000344726 BEAN1Q3B7T3 259 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 LINC01559Q495D7 138 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 TCTEX1D4Q5JR98 221 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 NKAPLQ5M9Q1 402 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 SAMD5Q5TGI4 173 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 Q6ZPA2 131 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 OR8H3Q8N146 312 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 PRR18Q8N4B5 295 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 C8orf31Q8N9H6 132 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 OR10V1Q8NGI7 309 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 ST6GALNAC6Q969X2 333 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
HMGN3-202ENST00000344726 AKR1E2Q96JD6 320 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 TM2D1Q9BX74 207 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 TMEM59Q9BXS4 323 aa11.47□□□□□ -0.57
HMGN3-202ENST00000344726 MBNL3Q9NUK0 354 aaKnown RBP11.47□□□□□ -0.57
HMGN3-202ENST00000344726 RAB26Q9ULW5 256 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms