RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PHPT1Q9NRX4 125 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PIGLQ9Y2B2 252 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 F8WDY8 70 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 MLNRO43193 412 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 C1orf127Q8N9H9 656 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 DCBLD2Q96PD2 775 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 LEPROTL1O95214 131 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 OR2H2O95918 312 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ERVK11-1P61568 191 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 TPTE2P1Q5T6R2 138 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PTH2Q96A98 100 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 TMED7Q9Y3B3 224 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 A0A1W2PPC4 97 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 UBE2L6O14933 153 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PRKNO60260 465 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 TM4SF1P30408 202 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 HINT1P49773 126 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF418Q8TF45 676 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SLC52A3Q9NQ40 469 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PRTFDC1Q9NRG1 225 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CD163L1Q9NR16 1453 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PRNPP04156 253 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CXCL3P19876 107 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 RRADP55042 308 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CCL23P55773 120 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 NPC2P61916 151 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 RPS24P62847 133 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 HYAL1Q12794 435 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ZNF664Q8N3J9 261 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 KIF1AQ12756 1690 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 BLVRBP30043 206 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 OR8B8Q15620 311 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 MCHR1Q99705 422 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 COL5A2P05997 1499 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 LOC730098B7Z3J9 87 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 IGHG3P01860 377 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 BTG2P78543 158 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CLEC20AQ6ZU45 233 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 C1orf174Q8IYL3 243 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ZG16BQ96DA0 208 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CD1DP15813 335 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CDKN1AP38936 164 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ID4P47928 161 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 FXYD4P59646 89 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 GNG3P63215 75 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 C9orf153Q5TBE3 101 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 EDA2RQ9HAV5 297 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CD84Q9UIB8 345 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 RIMBP3Q9UFD9 1639 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SAP18O00422 153 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 VEGFAP15692 232 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 DUSP3P51452 185 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 TTC9CQ8N5M4 171 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SLC2A4RGQ9NR83 387 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 CMC2Q9NRP2 79 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 A0A087WV62 115 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 WDR25Q64LD2 544 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 MRGPRX2Q96LB1 330 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 LTB4R2Q9NPC1 389 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 BOKQ9UMX3 212 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PSME4Q14997 1843 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 FCN3O75636 299 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SFT2D2O95562 160 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 LINC01545Q5VT33 79 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 OR4D11Q8NGI4 311 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SECTM1Q8WVN6 248 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 SFXN3Q9BWM7 321 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 WDR13Q9H1Z4 485 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 PPP1CCP36873 323 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 RPL34P49207 117 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 DAZLQ92904 295 aaKnown RBP3.32□□□□□ -1.88
SYNE2-202ENST00000344113 GTSF1LQ9H1H1 148 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 DOPEY1Q5JWR5 2465 aa3.32□□□□□ -1.88
SYNE2-202ENST00000344113 VDAC1P21796 283 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 LCN15Q6UWW0 184 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TMEM123Q8N131 208 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 RND1Q92730 232 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ZBTB45Q96K62 511 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 C22orf46C9J442 243 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 KLKB1P03952 638 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 DUTP33316 252 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ATRAIDQ6UW56 229 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 MUC20Q8N307 709 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 RPRMQ9NS64 109 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SLC7A10Q9NS82 523 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ZFC3H1O60293 1989 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 TRAV25A0A0B4J276 109 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 ICOSLGO75144 302 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 RBPMS2Q6ZRY4 209 aaKnown RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 OR10X1Q8NGY0 326 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 CXCL5P42830 114 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 MEF2BQ02080 365 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-202ENST00000344113 GPNMBQ14956 572 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 SLC25A35Q3KQZ1 300 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 PAQR3Q6TCH7 311 aa3.31□□□□□ -1.88
SYNE2-202ENST00000344113 GBGT1Q8N5D6 347 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms