RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 FAM76BQ5HYJ3 339 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 ZNF880Q6PDB4 577 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 H1FOOQ8IZA3 346 aaPredicted RBP16.41■□□□□ 0.22
COL9A3-201ENST00000343916 OR1J1Q8NGS3 322 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 AKR1E2Q96JD6 320 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 TRBV6-6A0A0A6YYG2 114 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 A0A0G2JRQ6 117 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 TMEM50AO95807 157 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 VDAC1P21796 283 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 PSG7Q13046 419 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 IZUMO4Q1ZYL8 232 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 VWA1Q6PCB0 445 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 CXorf67Q86X51 503 aaPredicted RBP16.41■□□□□ 0.22
COL9A3-201ENST00000343916 LYPD6BQ8NI32 183 aa16.41■□□□□ 0.22
COL9A3-201ENST00000343916 A0A1B0GV50 99 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 LRP5LA4QPB2 252 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 TSPAN15O95858 294 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 PRH1P02810 166 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 CBR1P16152 277 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 EPHA1P21709 976 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 F2RP25116 425 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 MPV17P39210 176 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 CEBPDP49716 269 aaPredicted RBP16.4■□□□□ 0.22
COL9A3-201ENST00000343916 UCP2P55851 309 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 HABP2Q14520 560 aaPredicted RBP16.4■□□□□ 0.22
COL9A3-201ENST00000343916 GABRA6Q16445 453 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 TMEM171Q8WVE6 324 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 C14orf79Q96F83 325 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 CLCC1Q96S66 551 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 SPIN2AQ99865 258 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 SPIN2BQ9BPZ2 258 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 ASCL3Q9NQ33 180 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 H0Y980 276 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 CST7O76096 145 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 NXPH2O95156 264 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 CAMLGP49069 296 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 TMEM217Q8N7C4 229 aa16.4■□□□□ 0.22
COL9A3-201ENST00000343916 FAM157AC9JC47 383 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 PROB1E7EW31 1015 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 IGHG3P01860 377 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 PSG2P11465 335 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 ERVK11-1P61568 191 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 TMEM182Q6ZP80 229 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-201ENST00000343916 Q6ZT83 130 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 TINAGQ9UJW2 476 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 TRAPPC2LQ9UL33 140 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 ACAA1P09110 424 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-201ENST00000343916 PPT1P50897 306 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 DVL1P1P54792 670 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-201ENST00000343916 ODF3L1Q8IXM7 274 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 TMEM252Q8N6L7 170 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 OR5D13Q8NGL4 314 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 CABLES2Q9BTV7 478 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 GLRX2Q9NS18 164 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 LYRM2Q9NU23 88 aaPredicted RBP16.39■□□□□ 0.21
COL9A3-201ENST00000343916 OR14J1Q9UGF5 321 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 CACFD1Q9UGQ2 172 aa16.39■□□□□ 0.21
COL9A3-201ENST00000343916 IGLV2-14P01704 120 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 C9orf106Q8NAJ2 232 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 KLF14Q8TD94 323 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-201ENST00000343916 LUZP4Q9P127 313 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 TAAR3PQ9P1P4 343 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 POLDIP2Q9Y2S7 368 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 DIDO1Q9BTC0 2240 aaKnown RBP16.38■□□□□ 0.21
COL9A3-201ENST00000343916 HSPA12AO43301 675 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 IFNA4P05014 189 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 CD82P27701 267 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 SNCAP37840 140 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 KIR2DL2P43627 348 aaPredicted RBP16.38■□□□□ 0.21
COL9A3-201ENST00000343916 VAMP2P63027 116 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 CACNA1DQ01668 2161 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 ID3Q02535 119 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 FOXF2Q12947 444 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 ZNF497Q6ZNH5 498 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 ZNF826PQ6ZT77 177 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 OR10V1Q8NGI7 309 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 OR5C1Q8NGR4 320 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 SMCO4Q9NRQ5 59 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 C19orf12Q9NSK7 152 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 FZR1Q9UM11 496 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 PPP1R3CQ9UQK1 317 aa16.38■□□□□ 0.21
COL9A3-201ENST00000343916 INTS1Q8N201 2190 aaKnown RBP16.37■□□□□ 0.21
COL9A3-201ENST00000343916 NBEAQ8NFP9 2946 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 CLEC18AA5D8T8 446 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 CHST1O43916 411 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 PGA5P0DJD9 388 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 RAC2P15153 192 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 RAB5BP61020 215 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 TESK1Q15569 626 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 RBMS3Q6XE24 437 aaKnown RBP16.37■□□□□ 0.21
COL9A3-201ENST00000343916 CLEC18CQ8NCF0 446 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 NANPQ8TBE9 248 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 PLEKHF2Q9H8W4 249 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 OBP2BQ9NPH6 170 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 RPS10P5Q9NQ39 176 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 J3QW42 95 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 GUSBP1Q15486 140 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 OR8G1Q15617 311 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 SLC16A13Q7RTY0 426 aa16.37■□□□□ 0.21
COL9A3-201ENST00000343916 RBM7Q9Y580 266 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms