RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CST9LQ9H4G1 147 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 G6PC2Q9NQR9 355 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 COX11Q9Y6N1 276 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 DNAH3Q8TD57 4116 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 TRAV30A0A087WSZ9 112 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 LOC100289279A0A1B0GTE1 492 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 CDHR4A6H8M9 788 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 NPIPA7E9PJI5 369 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 NPIPA3F8WFD2 350 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 CD3DP04234 171 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 NPIPA8P0DM63 369 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 SRMP19623 302 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 PRRX1P54821 245 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 PLCXD2Q0VAA5 305 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 SMIM21Q3B7S5 101 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 MBNL2Q5VZF2 373 aaKnown RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 LEG1Q6P5S2 330 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ANKRD16Q6P6B7 361 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 TEX43Q6ZNM6 134 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 C16orf47Q6ZP98 133 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 FOXL2NBQ6ZUU3 175 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 SUMF2Q8NBJ7 301 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM52Q8NDY8 209 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 OR10G3Q8NGC4 313 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 OR9K2Q8NGE7 335 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 OR4D5Q8NGN0 318 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ABHD3Q8WU67 409 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ERGIC1Q969X5 290 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 DEFB127Q9H1M4 99 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 RBM7Q9Y580 266 aaKnown RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 OTOGQ6ZRI0 2925 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 IGKV3-15P01624 115 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 IGHV4-39P01824 125 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 OR13C7P0DN81 318 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 CD37P11049 281 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ACVR1BP36896 505 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 HBA1P69905 142 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 TGFBR3Q03167 851 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ST3GAL3Q11203 375 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 FOXF1Q12946 379 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF311Q5JNZ3 666 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 RPL7L1Q6DKI1 246 aaKnown RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 PRSS41Q7RTY9 318 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 RBM45Q8IUH3 476 aaKnown RBP6.22□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM229BQ8NBD8 167 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 MOB3AQ96BX8 217 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 SMIM19Q96E16 107 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 SPXQ9BT56 116 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 C19orf24Q9BVV8 132 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 RAB1BQ9H0U4 201 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 METTL7AQ9H8H3 244 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 OR5AC2Q9NZP5 309 aa6.22□□□□□ -1.41
ZNF540-202ENST00000343599 XKRY2A2RUG3 117 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 B4DSR2 109 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 XKRYO14609 159 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 FCMRO60667 390 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 YPEL1O60688 119 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 OR5G3P0C626 314 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF735P0CB33 412 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 CXCR1P25024 350 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 TIA1P31483 386 aaKnown RBP eCLIP6.21□□□□□ -1.42
ZNF540-202ENST00000343599 SLC25A1P53007 311 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZP4Q12836 540 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 PGGHGQ32M88 737 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF836Q6ZNA1 936 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 MEPCEQ7L2J0 689 aaKnown RBP6.21□□□□□ -1.42
ZNF540-202ENST00000343599 KIR3DL3Q8N743 410 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 STPG4Q8N801 248 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 LFNGQ8NES3 379 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 OR4C5Q8NGB2 326 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 OR51A2Q8NGJ7 313 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 C4orf36Q96KX1 117 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF48Q96MX3 618 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-202ENST00000343599 YPEL2Q96QA6 119 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 PNO1Q9NRX1 252 aaKnown RBP6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF580Q9UK33 172 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 URGCP-MRPS24S4R325 110 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 CACNA1CQ13936 2221 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 IGHV2OR16-5A0A0B4J2B6 119 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-202ENST00000343599 BHLHE40O14503 412 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 OR6A2O95222 327 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 SCGB1D1O95968 90 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 MAKP20794 623 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 NTF4P34130 210 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 SSR2P43308 183 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 GPR4P46093 362 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 FHITP49789 147 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 RHOGP84095 191 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 COL10A1Q03692 680 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF85Q03923 595 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 BATFQ16520 125 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 KHDC1LQ5JSQ8 128 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 COX18Q8N8Q8 333 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF738Q8NE65 137 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 OR51A7Q8NH64 312 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 ZNF587Q96SQ5 575 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-202ENST00000343599 MDFIQ99750 246 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 SRD5A3Q9H8P0 318 aa6.21□□□□□ -1.42
ZNF540-202ENST00000343599 HINT3Q9NQE9 182 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms