RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PILRBQ9UKJ0 227 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 ZNF891A8MT65 544 aaPredicted RBP6.22□□□□□ -1.41
VCAN-202ENST00000342785 GZMHP20718 246 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 HES1Q14469 280 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 BTNL3Q6UXE8 466 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 CXXC4Q9H2H0 198 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 IGLV3-12A0A075B6K2 115 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 A8MXK9 166 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 CYTIPO60759 359 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 POM121L2Q96KW2 1035 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 GLRX2Q9NS18 164 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 DEFA4P12838 97 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 LY6G6FQ5SQ64 297 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 OR1K1Q8NGR3 316 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 CTDSP1Q9GZU7 261 aa6.22□□□□□ -1.41
VCAN-202ENST00000342785 INTS1Q8N201 2190 aaKnown RBP6.22□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A10PA6NDY2 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A18PA6NE21 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A16PA6NEW6 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A20PA6NIJ5 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A8PA6NJQ4 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A7PA6NKC0 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A22PA8MWA6 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A12PA8MX19 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A5PA8MXJ8 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A23PA8MXZ1 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 E9PQ18 207 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 OPN1MWP04001 364 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 OR10J4P0C629 311 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A15PP0C7V4 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A13PP0C7W8 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A14PP0C7W9 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 FAM90A24PP0C7X0 464 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 OPN1MW2P0DN77 364 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 OPN1MW3P0DN78 364 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 DLK1P80370 383 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 CFHR1Q03591 330 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 R3HDM4Q96D70 268 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 ZNF837Q96EG3 531 aaPredicted RBP6.21□□□□□ -1.41
VCAN-202ENST00000342785 LRFN3Q9BTN0 628 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 HEXA-AS1Q9H8Q6 139 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 MED13LQ71F56 2210 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 ABCA1O95477 2261 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 OR5H1A6NKK0 313 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 CDK2AP1O14519 115 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 RFPL3SP0C7P2 107 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 NTF3P20783 257 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 ARL3P36405 182 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 NPBWR2P48146 333 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 TRAT1Q6PIZ9 186 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 TPRX1Q8N7U7 411 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 TIMP4Q99727 224 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 TXN2Q99757 166 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 RNF122Q9H9V4 155 aa6.21□□□□□ -1.41
VCAN-202ENST00000342785 TRAV14DV4A0A0A6YYC5 116 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 TRAV20A0A0B4J274 112 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 LOC390937A0A1W2PQ73 354 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 DVL1O14640 695 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 KLK10O43240 276 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 PPP1CCP36873 323 aaKnown RBP6.21□□□□□ -1.42
VCAN-202ENST00000342785 ID4P47928 161 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 LGALS4P56470 323 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 KLF3P57682 345 aaPredicted RBP6.21□□□□□ -1.42
VCAN-202ENST00000342785 MRPS11P82912 194 aaKnown RBP6.21□□□□□ -1.42
VCAN-202ENST00000342785 PHYHD1Q5SRE7 291 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 PPP1R32Q7Z5V6 425 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 CRYABP02511 175 aaKnown RBP6.21□□□□□ -1.42
VCAN-202ENST00000342785 FABP1P07148 127 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 FHITP49789 147 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 MRGPRGQ86SM5 289 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 KCNMB2Q9Y691 235 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 VWA8A3KMH1 1905 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 AGFG2O95081 481 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 AESQ08117 197 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 STUMQ69YW2 141 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 PAQR4Q8N4S7 273 aaPredicted RBP6.21□□□□□ -1.42
VCAN-202ENST00000342785 CYB561D1Q8N8Q1 229 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 ZNF441Q8N8Z8 693 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 SLC25A28Q96A46 364 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 TPPP3Q9BW30 176 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 ZNF319Q9P2F9 582 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 FBLN5Q9UBX5 448 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 IL17BQ9UHF5 180 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 PRSS50Q9UI38 385 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 VAX2Q9UIW0 290 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 SEC14L6B5MCN3 397 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 GNG10P50151 68 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 PLAURQ03405 335 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 HABP2Q14520 560 aaPredicted RBP6.21□□□□□ -1.42
VCAN-202ENST00000342785 KHDC3LQ587J8 217 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 INO80CQ6PI98 192 aaPredicted RBP6.21□□□□□ -1.42
VCAN-202ENST00000342785 OR10S1Q8NGN2 331 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 SMDT1Q9H4I9 107 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 OR6C3Q9NZP0 311 aa6.21□□□□□ -1.42
VCAN-202ENST00000342785 DHRS11Q6UWP2 260 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 IMMP1LQ96LU5 166 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ANKRD36A6QL64 1941 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 ABCA4P78363 2273 aa6.2□□□□□ -1.42
VCAN-202ENST00000342785 IGKV1-9A0A0C4DH69 117 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms