RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 SUMF2Q8NBJ7 301 aa12.92□□□□□ -0.34
TRA2B-202ENST00000342294 FLYWCH2Q96CP2 140 aaKnown RBP12.92□□□□□ -0.34
TRA2B-202ENST00000342294 NRBF2Q96F24 287 aa12.92□□□□□ -0.34
TRA2B-202ENST00000342294 THAP7Q9BT49 309 aaPredicted RBP12.92□□□□□ -0.34
TRA2B-202ENST00000342294 ANKRD60Q9BZ19 345 aa12.92□□□□□ -0.34
TRA2B-202ENST00000342294 FAM107BQ9H098 131 aa12.92□□□□□ -0.34
TRA2B-202ENST00000342294 HIPK2Q9H2X6 1198 aa12.92□□□□□ -0.34
TRA2B-202ENST00000342294 RETNQ9HD89 108 aa12.92□□□□□ -0.34
TRA2B-202ENST00000342294 FBXO7Q9Y3I1 522 aa12.92□□□□□ -0.34
TRA2B-202ENST00000342294 AQP12BA6NM10 295 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 C12orf77C9JDV5 145 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 ARPC1BO15143 372 aaKnown RBP12.91□□□□□ -0.34
TRA2B-202ENST00000342294 HOXB6P17509 224 aaKnown RBP12.91□□□□□ -0.34
TRA2B-202ENST00000342294 ACTBP60709 375 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 ZSCAN26Q16670 478 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 CT45A1Q5HYN5 189 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 FAM220AQ7Z4H9 259 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 ANKRD13BQ86YJ7 626 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 AQP12AQ8IXF9 295 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 OR13C3Q8NGS6 347 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 CT45A3Q8NHU0 189 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 CASTOR1Q8WTX7 329 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 ELOVL1Q9BW60 279 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
TRA2B-202ENST00000342294 TMEM30CPA0ZSE6 113 aa12.9□□□□□ -0.34
TRA2B-202ENST00000342294 LANCL1O43813 399 aa12.9□□□□□ -0.34
TRA2B-202ENST00000342294 MITFO75030 526 aaPredicted RBP12.9□□□□□ -0.34
TRA2B-202ENST00000342294 CCR9P51686 369 aa12.9□□□□□ -0.34
TRA2B-202ENST00000342294 NDPQ00604 133 aa12.9□□□□□ -0.34
TRA2B-202ENST00000342294 C5orf64Q2M2E5 130 aa12.9□□□□□ -0.34
TRA2B-202ENST00000342294 LINC00322Q6ZN03 302 aaPredicted RBP12.9□□□□□ -0.34
TRA2B-202ENST00000342294 CCDC124Q96CT7 223 aaKnown RBP12.9□□□□□ -0.34
TRA2B-202ENST00000342294 ZNF446Q9NWS9 450 aa12.9□□□□□ -0.34
TRA2B-202ENST00000342294 FOXA2Q9Y261 457 aaPredicted RBP12.9□□□□□ -0.34
TRA2B-202ENST00000342294 A0A1W2PN81 502 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 OR4C45A6NMZ5 311 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 SULT1B1O43704 296 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 FAM107AO95990 144 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 CHRNA7P36544 502 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 LIN54Q6MZP7 749 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 ASCL4Q6XD76 172 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 NPBQ8NG41 125 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 OR10K1Q8NGX5 313 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 RHOVQ96L33 236 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 RSRP1Q9BUV0 290 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 NUBP2Q9Y5Y2 271 aa12.89□□□□□ -0.35
TRA2B-202ENST00000342294 GABRPO00591 440 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 NBR2O15453 112 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 IGHV3-11P01762 117 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 MT-ND4P03905 459 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 RAB40BQ12829 278 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 TMED1Q13445 227 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 ECSCRQ19T08 205 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 STEAP3Q658P3 488 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 KCTD20Q7Z5Y7 419 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 PARP16Q8N5Y8 322 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 TCTEX1D1Q8N7M0 179 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 OR5D14Q8NGL3 314 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 CCDC107Q8WV48 283 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 FAM110AQ9BQ89 295 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 TUBA4BQ9H853 241 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 FRAS1Q86XX4 4008 aa12.88□□□□□ -0.35
TRA2B-202ENST00000342294 FKBP6O75344 327 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 RGS11O94810 467 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 NDUFA3O95167 84 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 EGR2P11161 476 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-202ENST00000342294 ATP6V1E1P36543 226 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 NHLRC3Q5JS37 347 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 ZNF660Q6AZW8 331 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-202ENST00000342294 ZNF497Q6ZNH5 498 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 SERPINA12Q8IW75 414 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 TNFAIP8L1Q8WVP5 186 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 NABP2Q9BQ15 211 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 ZNF251Q9BRH9 671 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 TMED9Q9BVK6 235 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 CST11Q9H112 138 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 ERGIC3Q9Y282 383 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 ARL2BPQ9Y2Y0 163 aa12.87□□□□□ -0.35
TRA2B-202ENST00000342294 H0Y980 276 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 SLC25A17O43808 307 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 OR7C1O76099 320 aaPredicted RBP12.86□□□□□ -0.35
TRA2B-202ENST00000342294 HTR1AP08908 422 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 RSU1Q15404 277 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 TMEM30BQ3MIR4 351 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 RNLSQ5VYX0 342 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 LPCAT4Q643R3 524 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 ZNF529Q6P280 563 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 CD200R1LQ6Q8B3 271 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 GNG12Q9UBI6 72 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 ST3GAL6Q9Y274 331 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 PCLOQ9Y6V0 5065 aa12.86□□□□□ -0.35
TRA2B-202ENST00000342294 J3QRE1 110 aa12.85□□□□□ -0.35
TRA2B-202ENST00000342294 SLC16A6O15403 523 aa12.85□□□□□ -0.35
TRA2B-202ENST00000342294 DCTN3O75935 186 aa12.85□□□□□ -0.35
TRA2B-202ENST00000342294 HTR3BO95264 441 aa12.85□□□□□ -0.35
TRA2B-202ENST00000342294 LY6G6CO95867 125 aa12.85□□□□□ -0.35
TRA2B-202ENST00000342294 RBM11P57052 281 aaKnown RBP12.85□□□□□ -0.35
TRA2B-202ENST00000342294 CX3CL1P78423 397 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms