RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TAS2R19P59542 299 aa12.6□□□□□ -0.39
PBX3-201ENST00000342287 KRTCAP3Q53RY4 240 aa12.6□□□□□ -0.39
PBX3-201ENST00000342287 DNM1P46Q6ZS02 220 aa12.6□□□□□ -0.39
PBX3-201ENST00000342287 C9orf106Q8NAJ2 232 aa12.6□□□□□ -0.39
PBX3-201ENST00000342287 SUMF2Q8NBJ7 301 aa12.6□□□□□ -0.39
PBX3-201ENST00000342287 METTL8Q9H825 291 aaKnown RBP12.6□□□□□ -0.39
PBX3-201ENST00000342287 ZNF391Q9UJN7 358 aa12.6□□□□□ -0.39
PBX3-201ENST00000342287 URB1O60287 2271 aaKnown RBP12.6□□□□□ -0.39
PBX3-201ENST00000342287 MED19A0JLT2 244 aaPredicted RBP12.59□□□□□ -0.39
PBX3-201ENST00000342287 A6NJY4 79 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 TK1P04183 234 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 TMPRSS3P57727 454 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 ATP6V1FQ16864 119 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 BCL2L2Q92843 193 aaPredicted RBP12.59□□□□□ -0.39
PBX3-201ENST00000342287 REEP6Q96HR9 211 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 ALKBH7Q9BT30 221 aaPredicted RBP12.59□□□□□ -0.39
PBX3-201ENST00000342287 LUZP4Q9P127 313 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 APC2O95996 2303 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 AKR1C4P17516 323 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 ZBTB25P24278 435 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 EFNB2P52799 333 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 UCNP55089 124 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 FAM180AQ6UWF9 173 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
PBX3-201ENST00000342287 CNEP1R1Q8N9A8 125 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 OR56B2PQ8NGI1 322 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 TP53RKQ96S44 253 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 SCRT1Q9BWW7 348 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 OR2J1Q9GZK6 312 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 CNTD2Q9H8S5 307 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 PIGLQ9Y2B2 252 aa12.59□□□□□ -0.39
PBX3-201ENST00000342287 CHRNB4P30926 498 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 KIR2DL2P43627 348 aaPredicted RBP12.58□□□□□ -0.39
PBX3-201ENST00000342287 FHITP49789 147 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 UCP3P55916 312 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 SELENOTP62341 195 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 TGFBR3Q03167 851 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 PLP2Q04941 152 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 C1orf194Q5T5A4 169 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 NANOS1Q8WY41 292 aaKnown RBP12.58□□□□□ -0.39
PBX3-201ENST00000342287 SEH1LQ96EE3 360 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 C1QTNF5Q9BXJ0 243 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 VSIG4Q9Y279 399 aa12.58□□□□□ -0.39
PBX3-201ENST00000342287 FREM1Q5H8C1 2179 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 ZNF503-AS2A6NEH8 195 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 TRDCB7Z8K6 153 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 H3BQ15 152 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 ZNF93P35789 620 aaPredicted RBP12.58□□□□□ -0.4
PBX3-201ENST00000342287 HIKESHIQ53FT3 197 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 Q6ZT83 130 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 OR5AS1Q8N127 324 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 LYG1Q8N1E2 194 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 OR4D6Q8NGJ1 314 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 OR4K15Q8NH41 348 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 OR2AE1Q8NHA4 323 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 CSTL1Q9H114 145 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 K7EP13 123 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 OR5H8P0DN80 308 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 HLA-GP17693 338 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 KLF3P57682 345 aaPredicted RBP12.58□□□□□ -0.4
PBX3-201ENST00000342287 OR8G2PQ6IF36 304 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 ZNF101Q8IZC7 436 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 SMIM3Q9BZL3 60 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 SLC5A7Q9GZV3 580 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 KCNK15Q9H427 330 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 RHBDD3Q9Y3P4 386 aa12.58□□□□□ -0.4
PBX3-201ENST00000342287 TRBV6-7A0A0A0MS04 114 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 C5orf49A4QMS7 147 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 K7EPK0 472 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 CTAG2O75638 210 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 FAHP16930 419 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 COLCA1Q6ZS62 124 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 FAM71E2Q8N5Q1 922 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 MBD3L4A6NDZ8 208 aaPredicted RBP12.57□□□□□ -0.4
PBX3-201ENST00000342287 MBD3L3A6NE82 208 aaPredicted RBP12.57□□□□□ -0.4
PBX3-201ENST00000342287 MBD3L5A6NJ08 208 aaPredicted RBP12.57□□□□□ -0.4
PBX3-201ENST00000342287 M0QZ24 198 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 XRCC2O43543 280 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 WDR1O75083 606 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 OR5AC1P0C628 307 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 CCNOP22674 350 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 PTGER4P35408 488 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 DLK1P80370 383 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 HAGHQ16775 308 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 LHFPL4Q7Z7J7 247 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 OR5T1Q8NG75 326 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 OR51F2Q8NH61 342 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 MBD3L2Q8NHZ7 208 aaPredicted RBP12.57□□□□□ -0.4
PBX3-201ENST00000342287 PTX4Q96A99 478 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 MSL2Q9HCI7 577 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 RAB22AQ9UL26 194 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
PBX3-201ENST00000342287 LAMA5O15230 3695 aa12.56□□□□□ -0.4
PBX3-201ENST00000342287 IGKV1-9A0A0C4DH69 117 aa12.56□□□□□ -0.4
PBX3-201ENST00000342287 MELTFP08582 738 aa12.56□□□□□ -0.4
PBX3-201ENST00000342287 IGHV1-2P23083 117 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms