RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 IGLV3-1P01715 115 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 POU3F1Q03052 451 aaPredicted RBP15.93■□□□□ 0.14
SMPD1-201ENST00000342245 OCIAD2Q56VL3 154 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 STARD4Q96DR4 205 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 CCDC74BQ96LY2 380 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 STARD5Q9NSY2 213 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 RPH3ALQ9UNE2 315 aa15.93■□□□□ 0.14
SMPD1-201ENST00000342245 TMPRSS2O15393 492 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 DHRS3O75911 302 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 CNOT4O95628 575 aaKnown RBP15.92■□□□□ 0.14
SMPD1-201ENST00000342245 LINC00271P0C7V0 271 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 PVRP15151 417 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 CD33P20138 364 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 MESP2Q0VG99 397 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 NSDHLQ15738 373 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 ZNF525Q8N782 197 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 ALPK2Q86TB3 2170 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 DOCK9Q9BZ29 2069 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 SERF1AO75920 110 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 CTSSP25774 331 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 OR5D13Q8NGL4 314 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 FGF22Q9HCT0 170 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 TP53TG3Q9ULZ0 132 aa15.92■□□□□ 0.14
SMPD1-201ENST00000342245 SLC33A1O00400 549 aaPredicted RBP15.91■□□□□ 0.14
SMPD1-201ENST00000342245 GNRHRP30968 328 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 RHOGP84095 191 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 TMPRSS7Q7RTY8 843 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 TMEM234Q8WY98 164 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 CTXND1A0A1B0GTU2 59 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 C17orf105B2RV13 164 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 LHX2P50458 406 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 TMEM211Q6ICI0 200 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 Q6ZSR3 168 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 BAGE3Q86Y29 109 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 BAGE2Q86Y30 109 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 CST9LQ9H4G1 147 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 PCNX3Q9H6A9 2034 aa15.91■□□□□ 0.14
SMPD1-201ENST00000342245 LINC00310P59036 64 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 TLE3Q04726 772 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 VHLLQ6RSH7 139 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 UNQ5815/PRO19632Q6UWF5 114 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 OOSP2Q86WS3 158 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 MCEMP1Q8IX19 187 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 Q8N976 141 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 GPR146Q96CH1 333 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 RTN4RQ9BZR6 473 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 WDR61Q9GZS3 305 aaKnown RBP15.9■□□□□ 0.14
SMPD1-201ENST00000342245 LTBP2Q14767 1821 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 IGHV1-69-2A0A0G2JMI3 117 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 M0QZ24 198 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 REG1AP05451 166 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 CST6Q15828 149 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 PRTGQ2VWP7 1150 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 CALHM1Q8IU99 346 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 OR5P3Q8WZ94 311 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 SPSB1Q96BD6 273 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 MED29Q9NX70 200 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 MRPL27Q9P0M9 148 aaKnown RBP15.9■□□□□ 0.14
SMPD1-201ENST00000342245 TAAR3PQ9P1P4 343 aa15.9■□□□□ 0.14
SMPD1-201ENST00000342245 PHF3Q92576 2039 aaKnown RBP15.89■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF205O95201 554 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 ADH1BP00325 375 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 HOXB2P14652 356 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 BIDP55957 195 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 TMEM267Q0VDI3 215 aaPredicted RBP15.89■□□□□ 0.13
SMPD1-201ENST00000342245 TESK1Q15569 626 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 MRPL13Q9BYD1 178 aaKnown RBP15.89■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF814B7Z6K7 855 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 EFNA3P52797 238 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 SPIN3Q5JUX0 258 aa15.89■□□□□ 0.13
SMPD1-201ENST00000342245 PNRC2Q9NPJ4 139 aaKnown RBP15.89■□□□□ 0.13
SMPD1-201ENST00000342245 A0A1W2PNV4 684 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 GRIFINA4D1Z8 144 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 H0Y980 276 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 K7ERU9 68 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 PDE6DO43924 150 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 PRKNO60260 465 aaPredicted RBP15.88■□□□□ 0.13
SMPD1-201ENST00000342245 ZNF253O75346 499 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 HOXC12P31275 282 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 OR2M7Q8NG81 312 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 SGMS2Q8NHU3 365 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 PSMF1Q92530 271 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 FAM60AQ9NP50 221 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 CCDC163A0A0D9SF12 145 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 GPX1P07203 203 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 WNT2P09544 360 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 TSPOP30536 169 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 APOBEC3AP31941 199 aaPredicted RBP15.88■□□□□ 0.13
SMPD1-201ENST00000342245 VEGFBP49765 207 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 CLRN1P58418 232 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 KRTDAPP60985 99 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 ARF6P62330 175 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 FBXL7Q9UJT9 491 aa15.88■□□□□ 0.13
SMPD1-201ENST00000342245 TRBV9A0A0B4J1U6 114 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 CTSBP07858 339 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 IL11P20809 199 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 FFAR4Q5NUL3 377 aa15.87■□□□□ 0.13
SMPD1-201ENST00000342245 RPP25LQ8N5L8 163 aaKnown RBP15.87■□□□□ 0.13
SMPD1-201ENST00000342245 C12orf76Q8N812 135 aaPredicted RBP15.87■□□□□ 0.13
SMPD1-201ENST00000342245 TAF15Q92804 592 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms