RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 B3GALT5-AS1P59052 145 aa12.32□□□□□ -0.44
CPSF7-201ENST00000340437 HOXA4Q00056 320 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-201ENST00000340437 Q0VFX4 171 aa12.32□□□□□ -0.44
CPSF7-201ENST00000340437 SPINK9Q5DT21 86 aa12.32□□□□□ -0.44
CPSF7-201ENST00000340437 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
CPSF7-201ENST00000340437 DEFB123Q8N688 67 aa12.32□□□□□ -0.44
CPSF7-201ENST00000340437 SF3B5Q9BWJ5 86 aaKnown RBP12.32□□□□□ -0.44
CPSF7-201ENST00000340437 FGF23Q9GZV9 251 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-201ENST00000340437 UNKLQ9H9P5 680 aaKnown RBP12.32□□□□□ -0.44
CPSF7-201ENST00000340437 GAR1Q9NY12 217 aaKnown RBP12.32□□□□□ -0.44
CPSF7-201ENST00000340437 COL5A1P20908 1838 aaPredicted RBP12.32□□□□□ -0.44
CPSF7-201ENST00000340437 RHBDL1O75783 438 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 THOC3Q96J01 351 aaKnown RBP12.31□□□□□ -0.44
CPSF7-201ENST00000340437 CEP295Q9C0D2 2601 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 ZNF503-AS2A6NEH8 195 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 IL11RAQ14626 422 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 ELOBQ15370 118 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 HIKESHIQ53FT3 197 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 PYY3Q5JQD4 70 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-201ENST00000340437 MCEMP1Q8IX19 187 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 GNPNAT1Q96EK6 184 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-201ENST00000340437 RPRMQ9NS64 109 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 ZMAT5Q9UDW3 170 aaKnown RBP12.31□□□□□ -0.44
CPSF7-201ENST00000340437 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
CPSF7-201ENST00000340437 UCP3P55916 312 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 ADIRFQ15847 76 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 TMEM42Q69YG0 159 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 Q6ZRM9 215 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 M1APQ8TC57 530 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 TUBA4BQ9H853 241 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 PSENENQ9NZ42 101 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 KIAA1456Q9P272 454 aa12.31□□□□□ -0.44
CPSF7-201ENST00000340437 FGF5P12034 268 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 GTF3C1Q12789 2109 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 WDR25Q64LD2 544 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-201ENST00000340437 RPUSD4Q96CM3 377 aaKnown RBP12.3□□□□□ -0.44
CPSF7-201ENST00000340437 PLPPR2Q96GM1 343 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 WDR54Q9H977 334 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 TRAPPC2LQ9UL33 140 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 PPP1R2P9O14990 202 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-201ENST00000340437 CLDN23Q96B33 292 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 SNX22Q96L94 193 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 ATP5SQ99766 215 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 SEBOXQ9HB31 216 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-201ENST00000340437 LOC102723996A0A087X1L8 192 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 HLA-DRB3P79483 266 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 OR8B8Q15620 311 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 CXorf67Q86X51 503 aaPredicted RBP12.3□□□□□ -0.44
CPSF7-201ENST00000340437 CCDC54Q8NEL0 328 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 SIGLEC12Q96PQ1 595 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 SSX3Q99909 188 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 TAAR3PQ9P1P4 343 aa12.3□□□□□ -0.44
CPSF7-201ENST00000340437 KIR2DS1A0A191URI9 304 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 F2RP25116 425 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 KIR2DS4P43632 304 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 PLP2Q04941 152 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 KIR2DS1Q14954 304 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 DAZAP2Q15038 168 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-201ENST00000340437 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-201ENST00000340437 ODF3L1Q8IXM7 274 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 CACNA1BQ00975 2339 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 UBE2L5PA0A1B0GUS4 154 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 LRRC3CA6NJW4 275 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 DEGS1O15121 323 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 CLDN1O95832 211 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 KCNE4Q8WWG9 221 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 ANKRD30BLA7E2S9 258 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BKO60814 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BJP06899 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 DEFA4P12838 97 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BOP23527 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BBP33778 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BDP58876 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 FGF12P61328 243 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BCP62807 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 EIF3IQ13347 325 aaKnown RBP12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST2H2BEQ16778 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 LTC4SQ16873 150 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-201ENST00000340437 ASCL4Q6XD76 172 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 FAM185AQ8N0U4 392 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BHQ93079 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 FAM210BQ96KR6 192 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BNQ99877 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 HIST1H2BMQ99879 126 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
CPSF7-201ENST00000340437 TFF1P04155 84 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 PGA5P0DJD9 388 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 MAGEA5P43359 124 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 CEBPDP49716 269 aaPredicted RBP12.28□□□□□ -0.44
CPSF7-201ENST00000340437 STARD6P59095 220 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 TAS2R30P59541 319 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 PMP22Q01453 160 aa12.28□□□□□ -0.44
CPSF7-201ENST00000340437 ID3Q02535 119 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms