RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 PSPNO60542 156 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 IFNA2P01563 188 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 SLC25A4P12235 298 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 PTHLHP12272 177 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 LYL1P12980 280 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 MMP9P14780 707 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 DTX3Q8N9I9 347 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 NINJ1Q92982 152 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 MBD6Q96DN6 1003 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 NEIL1Q96FI4 390 aaPredicted RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 ST6GAL2Q96JF0 529 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 ZMAT3Q9HA38 289 aaKnown RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 BEX4Q9NWD9 120 aaPredicted RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 IDI2-AS1Q9NZ38 188 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 ELF5Q9UKW6 265 aaPredicted RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 PPIAL4CA0A0B4J2A2 164 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 TEX13DA0A0J9YY54 714 aaPredicted RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 HMSDA8MTL9 139 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 C17orf98A8MV24 154 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 GRNP28799 593 aaKnown RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 FCGR2CP31995 323 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 RNASE12Q5GAN4 147 aaKnown RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 ZNF826PQ6ZT77 177 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 LSM10Q969L4 123 aaKnown RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 HYLS1Q96M11 299 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 BBC3Q96PG8 261 aaPredicted RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 HSD17B10Q99714 261 aaKnown RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 AIFM2Q9BRQ8 373 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 ZNF436Q9C0F3 470 aaPredicted RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 LIN7CQ9NUP9 197 aaKnown RBP5.97□□□□□ -1.45
NUP43-201ENST00000340413 TMED3Q9Y3Q3 217 aa5.97□□□□□ -1.45
NUP43-201ENST00000340413 ZFYVE26Q68DK2 2539 aa5.96□□□□□ -1.45
NUP43-201ENST00000340413 TXNL1O43396 289 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 CCNKO75909 580 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 RRASP10301 218 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 UCP1P25874 307 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 CD80P33681 288 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 DHRS2Q13268 280 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 HERPUD1Q15011 391 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 LIN54Q6MZP7 749 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 TMEM65Q6PI78 240 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 NLRC3Q7RTR2 1065 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 LGI3Q8N145 548 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 TMEM230Q96A57 120 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 SPIN2AQ99865 258 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 SPIN2BQ9BPZ2 258 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 GSX2Q9BZM3 304 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 PLEKHF2Q9H8W4 249 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 UNKLQ9H9P5 680 aaKnown RBP5.96□□□□□ -1.46
NUP43-201ENST00000340413 TAF9BQ9HBM6 251 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 GFOD1Q9NXC2 390 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 IL36RNQ9UBH0 155 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 MAB21L2Q9Y586 359 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 IGKV1D-8A0A087WSZ0 117 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 A0A1B0GVG6 124 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 hCG_1809904A0A1W2PP81 198 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 A0A1W2PPE2 198 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 A0A1W2PR64 198 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 A0A1W2PRV1 198 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 VGLL3A8MV65 326 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 C12orf77C9JDV5 145 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 WNT9BO14905 357 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 LIPFP07098 398 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 PGAM2P15259 253 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 AADACP22760 399 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 HEPN1Q6WQI6 88 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 OR8B3Q8NGG8 313 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 DYRK2Q92630 601 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 OR8B2Q96RD0 313 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 COA4Q9NYJ1 87 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 LOC400499M0QZD8 3231 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 IGKV1-6A0A0C4DH72 117 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 CDS2O95674 445 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 CATR1Q13166 79 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 SCGB2B2Q4G0G5 96 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 ABCA11PQ4W5N1 156 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 LIAT1Q6ZQX7 453 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 MARCH1Q8TCQ1 289 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 HDHD3Q9BSH5 251 aaPredicted RBP5.96□□□□□ -1.46
NUP43-201ENST00000340413 PCGF1Q9BSM1 259 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 DCTN5Q9BTE1 182 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 PATZ1Q9HBE1 687 aaKnown RBP5.96□□□□□ -1.46
NUP43-201ENST00000340413 UFSP2Q9NUQ7 469 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 CALYQ9NYX4 217 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 SLC25A10Q9UBX3 287 aaPredicted RBP5.96□□□□□ -1.46
NUP43-201ENST00000340413 KIF25Q9UIL4 384 aa5.96□□□□□ -1.46
NUP43-201ENST00000340413 TRAV6A0A075B6T7 132 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 MEIS3P1A6NDR6 274 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 PLAUP00749 431 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 HBZP02008 142 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 PET100P0DJ07 73 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 COX6B1P14854 86 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 IL2RGP31785 369 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 PDLIM4P50479 330 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 DLX6P56179 175 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 TMEM187Q14656 261 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 DHRS7BQ6IAN0 325 aaPredicted RBP5.95□□□□□ -1.46
NUP43-201ENST00000340413 ZNF439Q8NDP4 499 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 C18orf12Q96KH6 178 aa5.95□□□□□ -1.46
NUP43-201ENST00000340413 COMMD9Q9P000 198 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms