RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ACTR3CQ9C0K3 210 aaPredicted RBP12.66□□□□□ -0.38
RET-201ENST00000340058 MPTX1A8MV57 137 aa12.66□□□□□ -0.38
RET-201ENST00000340058 RHBDL1O75783 438 aa12.66□□□□□ -0.38
RET-201ENST00000340058 ID4P47928 161 aa12.66□□□□□ -0.38
RET-201ENST00000340058 ZFP36L1Q07352 338 aaKnown RBP12.66□□□□□ -0.38
RET-201ENST00000340058 SRSF6Q13247 344 aaKnown RBP12.66□□□□□ -0.38
RET-201ENST00000340058 MOB1BQ7L9L4 216 aa12.66□□□□□ -0.38
RET-201ENST00000340058 OR1L1Q8NH94 360 aa12.66□□□□□ -0.38
RET-201ENST00000340058 TAAR6Q96RI8 345 aa12.66□□□□□ -0.38
RET-201ENST00000340058 CCL13Q99616 98 aa12.66□□□□□ -0.38
RET-201ENST00000340058 TNFSF18Q9UNG2 199 aa12.66□□□□□ -0.38
RET-201ENST00000340058 CEP295Q9C0D2 2601 aa12.66□□□□□ -0.38
RET-201ENST00000340058 OR2H2O95918 312 aa12.66□□□□□ -0.38
RET-201ENST00000340058 CLPSP04118 112 aa12.66□□□□□ -0.38
RET-201ENST00000340058 CELA3BP08861 270 aa12.66□□□□□ -0.38
RET-201ENST00000340058 NMBP08949 121 aa12.66□□□□□ -0.38
RET-201ENST00000340058 HLA-DRB3P79483 266 aa12.66□□□□□ -0.38
RET-201ENST00000340058 FFAR4Q5NUL3 377 aa12.66□□□□□ -0.38
RET-201ENST00000340058 FAM24BQ8N5W8 94 aa12.66□□□□□ -0.38
RET-201ENST00000340058 SSMEM1Q8WWF3 244 aa12.66□□□□□ -0.38
RET-201ENST00000340058 USB1Q9BQ65 265 aaKnown RBP12.66□□□□□ -0.38
RET-201ENST00000340058 IL36GQ9NZH8 169 aa12.66□□□□□ -0.38
RET-201ENST00000340058 OR1A1Q9P1Q5 309 aa12.66□□□□□ -0.38
RET-201ENST00000340058 DVL1O14640 695 aa12.65□□□□□ -0.38
RET-201ENST00000340058 FAM201AQ5SY85 155 aa12.65□□□□□ -0.38
RET-201ENST00000340058 OR2V2Q96R30 315 aa12.65□□□□□ -0.38
RET-201ENST00000340058 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
RET-201ENST00000340058 SPINK4O60575 86 aa12.65□□□□□ -0.38
RET-201ENST00000340058 FGF12P61328 243 aa12.65□□□□□ -0.38
RET-201ENST00000340058 SURF2Q15527 256 aaPredicted RBP12.65□□□□□ -0.38
RET-201ENST00000340058 ZNF660Q6AZW8 331 aaPredicted RBP12.65□□□□□ -0.38
RET-201ENST00000340058 RTN4RL2Q86UN3 420 aa12.65□□□□□ -0.38
RET-201ENST00000340058 ITLN1Q8WWA0 313 aa12.65□□□□□ -0.38
RET-201ENST00000340058 FAM131CQ96AQ9 280 aa12.65□□□□□ -0.38
RET-201ENST00000340058 ALX4Q9H161 411 aaPredicted RBP12.65□□□□□ -0.38
RET-201ENST00000340058 LPAR2Q9HBW0 351 aa12.65□□□□□ -0.38
RET-201ENST00000340058 AURKAIP1Q9NWT8 199 aaPredicted RBP12.65□□□□□ -0.38
RET-201ENST00000340058 IGKV1-9A0A0C4DH69 117 aa12.65□□□□□ -0.38
RET-201ENST00000340058 TFF1P04155 84 aa12.65□□□□□ -0.38
RET-201ENST00000340058 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
RET-201ENST00000340058 ERHP84090 104 aaKnown RBP12.65□□□□□ -0.38
RET-201ENST00000340058 COL10A1Q03692 680 aa12.65□□□□□ -0.38
RET-201ENST00000340058 HMGN3Q15651 99 aa12.65□□□□□ -0.38
RET-201ENST00000340058 HFEQ30201 348 aa12.65□□□□□ -0.38
RET-201ENST00000340058 VAX1Q5SQQ9 334 aa12.65□□□□□ -0.38
RET-201ENST00000340058 CIB3Q96Q77 187 aaPredicted RBP12.65□□□□□ -0.38
RET-201ENST00000340058 CABLES2Q9BTV7 478 aa12.65□□□□□ -0.38
RET-201ENST00000340058 GNB4Q9HAV0 340 aa12.65□□□□□ -0.38
RET-201ENST00000340058 CLN8Q9UBY8 286 aa12.65□□□□□ -0.38
RET-201ENST00000340058 PTPN13Q12923 2485 aa12.65□□□□□ -0.38
RET-201ENST00000340058 TMEM41BQ5BJD5 291 aa12.64□□□□□ -0.39
RET-201ENST00000340058 KLF14Q8TD94 323 aaPredicted RBP12.64□□□□□ -0.39
RET-201ENST00000340058 DHRS9Q9BPW9 319 aa12.64□□□□□ -0.39
RET-201ENST00000340058 GLRX2Q9NS18 164 aa12.64□□□□□ -0.39
RET-201ENST00000340058 DLL3Q9NYJ7 618 aa12.64□□□□□ -0.39
RET-201ENST00000340058 CLDN14O95500 239 aa12.64□□□□□ -0.39
RET-201ENST00000340058 IGHMP01871 453 aa12.64□□□□□ -0.39
RET-201ENST00000340058 NPBWR1P48145 328 aa12.64□□□□□ -0.39
RET-201ENST00000340058 EWSR1Q01844 656 aaKnown RBP eCLIP12.64□□□□□ -0.39
RET-201ENST00000340058 FADS6Q8N9I5 356 aa12.64□□□□□ -0.39
RET-201ENST00000340058 NANPQ8TBE9 248 aa12.64□□□□□ -0.39
RET-201ENST00000340058 Q96M66 194 aa12.64□□□□□ -0.39
RET-201ENST00000340058 NMES1Q9C002 83 aa12.64□□□□□ -0.39
RET-201ENST00000340058 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
RET-201ENST00000340058 CYC1P08574 325 aa12.64□□□□□ -0.39
RET-201ENST00000340058 PRDX2P32119 198 aa12.64□□□□□ -0.39
RET-201ENST00000340058 BTCP35070 178 aa12.64□□□□□ -0.39
RET-201ENST00000340058 C10orf128Q5T292 105 aa12.64□□□□□ -0.39
RET-201ENST00000340058 RAB40CQ96S21 281 aa12.64□□□□□ -0.39
RET-201ENST00000340058 IGHV3-72A0A0B4J1Y9 119 aa12.64□□□□□ -0.39
RET-201ENST00000340058 MAP1LC3B2A6NCE7 125 aa12.64□□□□□ -0.39
RET-201ENST00000340058 NCBP2LA6PVI3 153 aaKnown RBP12.64□□□□□ -0.39
RET-201ENST00000340058 MFNGO00587 321 aa12.64□□□□□ -0.39
RET-201ENST00000340058 OR10J4P0C629 311 aa12.64□□□□□ -0.39
RET-201ENST00000340058 ACSM6Q6P461 480 aa12.64□□□□□ -0.39
RET-201ENST00000340058 ASB13Q8WXK3 278 aa12.64□□□□□ -0.39
RET-201ENST00000340058 SAT2Q96F10 170 aaPredicted RBP12.64□□□□□ -0.39
RET-201ENST00000340058 MAP1LC3BQ9GZQ8 125 aa12.64□□□□□ -0.39
RET-201ENST00000340058 SIGIRRQ6IA17 410 aa12.63□□□□□ -0.39
RET-201ENST00000340058 BVESQ8NE79 360 aa12.63□□□□□ -0.39
RET-201ENST00000340058 R3HDM4Q96D70 268 aa12.63□□□□□ -0.39
RET-201ENST00000340058 PRR33A8MZF0 331 aa12.63□□□□□ -0.39
RET-201ENST00000340058 IL13RA2Q14627 380 aa12.63□□□□□ -0.39
RET-201ENST00000340058 ACOT6Q3I5F7 207 aaPredicted RBP12.63□□□□□ -0.39
RET-201ENST00000340058 KCNIP4Q6PIL6 250 aa12.63□□□□□ -0.39
RET-201ENST00000340058 LAMP3Q9UQV4 416 aa12.63□□□□□ -0.39
RET-201ENST00000340058 OTOGLQ3ZCN5 2332 aa12.63□□□□□ -0.39
RET-201ENST00000340058 IGHV3-21A0A0B4J1V1 117 aa12.63□□□□□ -0.39
RET-201ENST00000340058 ZP3P21754 424 aa12.63□□□□□ -0.39
RET-201ENST00000340058 FAM27E3Q08E93 113 aa12.63□□□□□ -0.39
RET-201ENST00000340058 TMEM54Q969K7 222 aa12.63□□□□□ -0.39
RET-201ENST00000340058 PPP5D1E7EU14 171 aa12.62□□□□□ -0.39
RET-201ENST00000340058 CCL21O00585 134 aa12.62□□□□□ -0.39
RET-201ENST00000340058 SCGB2A1O75556 95 aa12.62□□□□□ -0.39
RET-201ENST00000340058 HBZP02008 142 aa12.62□□□□□ -0.39
RET-201ENST00000340058 GYPAP02724 150 aa12.62□□□□□ -0.39
RET-201ENST00000340058 ZNF429Q86V71 674 aa12.62□□□□□ -0.39
RET-201ENST00000340058 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
RET-201ENST00000340058 CMTM2Q8TAZ6 248 aa12.62□□□□□ -0.39
RET-201ENST00000340058 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms