RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 TMEM171Q8WVE6 324 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 MRPL37Q9BZE1 423 aaKnown RBP12.99□□□□□ -0.33
MBD1-203ENST00000339998 HES4Q9HCC6 221 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 DCAF16Q9NXF7 216 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 ZDHHC8Q9ULC8 765 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 OR2W1Q9Y3N9 320 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 DEFB108AA8MXU0 73 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.99□□□□□ -0.33
MBD1-203ENST00000339998 PGLYRP1O75594 196 aaPredicted RBP12.99□□□□□ -0.33
MBD1-203ENST00000339998 IGLV2-14P01704 120 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 CEACAM6P40199 344 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 UBA52P62987 128 aaKnown RBP12.99□□□□□ -0.33
MBD1-203ENST00000339998 MOGAT3Q86VF5 341 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 H1FOOQ8IZA3 346 aaPredicted RBP12.99□□□□□ -0.33
MBD1-203ENST00000339998 LGI3Q8N145 548 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 OR52L2PQ8NGH6 319 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 SFXN3Q9BWM7 321 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 SUCNR1Q9BXA5 334 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 TMEM222Q9H0R3 208 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 TAAR3PQ9P1P4 343 aa12.99□□□□□ -0.33
MBD1-203ENST00000339998 A0A0G2JRQ6 117 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 A0A1B0GW55 424 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 TMEM210A6NLX4 147 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 PRSS44E7EML9 344 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 K7EPK0 472 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4L2P0CJ85 424 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4L3P0CJ86 424 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4L4P0CJ87 422 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4L5P0CJ88 424 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4L6P0CJ89 424 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4L7P0CJ90 424 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4L9Q6RFH8 374 aaPredicted RBP12.98□□□□□ -0.33
MBD1-203ENST00000339998 Q8IYB0 196 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 FAM71E2Q8N5Q1 922 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 CCDC71LQ8N9Z2 235 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 OR4A4PQ8NGN8 299 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DUX4Q9UBX2 424 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 KCNS2Q9ULS6 477 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 SVEP1Q4LDE5 3571 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 B8ZZF3 427 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 ADAM20O43506 726 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 DEDDO75618 318 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 PSG2P11465 335 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 EPHA1P21709 976 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 RPL12P30050 165 aaKnown RBP12.98□□□□□ -0.33
MBD1-203ENST00000339998 CXorf66Q5JRM2 361 aaPredicted RBP12.98□□□□□ -0.33
MBD1-203ENST00000339998 ZNF695Q8IW36 515 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 SELENOHQ8IZQ5 122 aaKnown RBP12.98□□□□□ -0.33
MBD1-203ENST00000339998 POM121Q96HA1 1249 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 LINC00052Q96N35 136 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 TUBD1Q9UJT1 453 aa12.98□□□□□ -0.33
MBD1-203ENST00000339998 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 POLR2GP62487 172 aaKnown RBP eCLIP12.97□□□□□ -0.33
MBD1-203ENST00000339998 OR2B11Q5JQS5 317 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 PDZD9Q8IXQ8 264 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 ZNRF1Q8ND25 227 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 ITLN1Q8WWA0 313 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 RIMS4Q9H426 269 aaPredicted RBP12.97□□□□□ -0.33
MBD1-203ENST00000339998 IFT22Q9H7X7 185 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 H7C1Q1 480 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 FBXO24O75426 580 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 NKX6-1P78426 367 aaPredicted RBP12.97□□□□□ -0.33
MBD1-203ENST00000339998 SPERTQ8NA61 448 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 OR10V1Q8NGI7 309 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 RBPMSQ93062 196 aaKnown RBP12.97□□□□□ -0.33
MBD1-203ENST00000339998 SLX1AQ9BQ83 275 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 PCDHB10Q9UN67 800 aa12.97□□□□□ -0.33
MBD1-203ENST00000339998 LYL1P12980 280 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 ARHGDIBP52566 201 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 AKR1C2P52895 323 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 KLF3P57682 345 aaPredicted RBP12.96□□□□□ -0.33
MBD1-203ENST00000339998 NHLH2Q02577 135 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 AKR1C1Q04828 323 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 GCSAMQ8N6F7 178 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 DEFB108BQ8NET1 73 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 OR13A1Q8NGR1 328 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 SHARPINQ9H0F6 387 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 MSRB2Q9Y3D2 182 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 RFNGQ9Y644 331 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 ASH1LQ9NR48 2969 aaKnown RBP12.96□□□□□ -0.33
MBD1-203ENST00000339998 TRBV6-6A0A0A6YYG2 114 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 CD40P25942 277 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 TMEM33P57088 247 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 UTF1Q5T230 341 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 ZNF808Q8N4W9 903 aaPredicted RBP12.96□□□□□ -0.33
MBD1-203ENST00000339998 AQP10Q96PS8 301 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 FBXL17Q9UF56 701 aa12.96□□□□□ -0.33
MBD1-203ENST00000339998 RCL1Q9Y2P8 373 aaKnown RBP12.96□□□□□ -0.33
MBD1-203ENST00000339998 YLPM1P49750 1951 aaKnown RBP12.96□□□□□ -0.33
MBD1-203ENST00000339998 IGKV1D-17A0A075B6S4 117 aa12.96□□□□□ -0.34
MBD1-203ENST00000339998 MFSD2BA6NFX1 497 aa12.96□□□□□ -0.34
MBD1-203ENST00000339998 OMGP23515 440 aa12.96□□□□□ -0.34
MBD1-203ENST00000339998 PPP1CCP36873 323 aaKnown RBP12.96□□□□□ -0.34
MBD1-203ENST00000339998 NUP62P37198 522 aaPredicted RBP12.96□□□□□ -0.34
MBD1-203ENST00000339998 SRSF7Q16629 238 aaKnown RBP eCLIP12.96□□□□□ -0.34
MBD1-203ENST00000339998 BAP18Q8IXM2 172 aa12.96□□□□□ -0.34
MBD1-203ENST00000339998 STPG2Q8N412 459 aa12.96□□□□□ -0.34
MBD1-203ENST00000339998 SPTAN1Q13813 2472 aaKnown RBP12.95□□□□□ -0.34
MBD1-203ENST00000339998 MED19A0JLT2 244 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms