RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 MRPL30Q8TCC3 161 aaKnown RBP8.06□□□□□ -1.12
NECAP1-201ENST00000339754 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-201ENST00000339754 LHX4Q969G2 390 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 FOXJ2Q9P0K8 574 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 TP53TG3Q9ULZ0 132 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 PAM16Q9Y3D7 125 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 IGKV1-12A0A0C4DH73 117 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 KIR2DS5A0A0G2JLQ3 304 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 A0A0G2JNG1 304 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 A0A0G2JRQ6 117 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 TMEM150CB9EJG8 249 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 KIR2DS3K7RE56 304 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 TRAF3IP2O43734 574 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-201ENST00000339754 IGKV1D-33P01593 117 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 IGKV1-33P01594 117 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 IGKV1D-12P01611 117 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 TDGF1P13385 188 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 KIR2DL1P43626 348 aaPredicted RBP8.06□□□□□ -1.12
NECAP1-201ENST00000339754 CDKN1BP46527 198 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 LINC00310P59036 64 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 MYBPHQ13203 477 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 KIR2DS5Q14953 304 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 PDCD1Q15116 288 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 SPIN3Q5JUX0 258 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 TMEM211Q6ICI0 200 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 HAPLN4Q86UW8 402 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 GAPTQ8N292 157 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 RPP25LQ8N5L8 163 aaKnown RBP8.06□□□□□ -1.12
NECAP1-201ENST00000339754 C10orf35Q96D05 121 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 SLC35E1Q96K37 410 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 PPIAL4AQ9Y536 164 aa8.06□□□□□ -1.12
NECAP1-201ENST00000339754 LRP4O75096 1905 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 NKX6-3A6NJ46 265 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 ZNF814B7Z6K7 855 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 CNOT4O95628 575 aaKnown RBP8.05□□□□□ -1.12
NECAP1-201ENST00000339754 CDKN1AP38936 164 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 COMPP49747 757 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-201ENST00000339754 HHEXQ03014 270 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 ZNF542PQ5EBM4 170 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 FAM78BQ5VT40 261 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 KCNIP4Q6PIL6 250 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 WDR5BQ86VZ2 330 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 STPG4Q8N801 248 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 CPEB3Q8NE35 698 aaKnown RBP8.05□□□□□ -1.12
NECAP1-201ENST00000339754 OR51B6Q9H340 312 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 SLC39A9Q9NUM3 307 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 IGKV1D-13A0A0B4J2D9 117 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 A0A0U1RQK1 487 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 ZNF320A2RRD8 509 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 PDGFBP01127 241 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-201ENST00000339754 OPN1LWP04000 364 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 IGKV1-13P0DP09 117 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 CHRNA7P36544 502 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 PAFAH1B2P68402 229 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 MMDQ15546 238 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 TESK1Q15569 626 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 OR8B8Q15620 311 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 TMEM183BQ1AE95 376 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 TMEM196Q5HYL7 178 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 C16orf47Q6ZP98 133 aaPredicted RBP8.05□□□□□ -1.12
NECAP1-201ENST00000339754 CMTM2Q8TAZ6 248 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 GATAD1Q8WUU5 269 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 PINX1Q96BK5 328 aaKnown RBP8.05□□□□□ -1.12
NECAP1-201ENST00000339754 GPR146Q96CH1 333 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 RAB40CQ96S21 281 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 PLK3Q9H4B4 646 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 ARHGAP21Q5T5U3 1957 aa8.05□□□□□ -1.12
NECAP1-201ENST00000339754 C20orf202A1L168 122 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 VSTM2BA6NLU5 285 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 K7EP13 123 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 VENTXO95231 258 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 COL9A1P20849 921 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 NPPCP23582 126 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 EPHA8P29322 1005 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-201ENST00000339754 OTX1P32242 354 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-201ENST00000339754 PSMB3P49720 205 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 BPIFB3P59826 476 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 RPS18P62269 152 aaKnown RBP8.04□□□□□ -1.12
NECAP1-201ENST00000339754 TFF2Q03403 129 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 DAZAP2Q15038 168 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-201ENST00000339754 LEMD1Q68G75 181 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 Q6ZSR6 202 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 OSR2Q8N2R0 312 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 OR5D13Q8NGL4 314 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 SPSB1Q96BD6 273 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 VAMP8Q9BV40 100 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 WDR61Q9GZS3 305 aaKnown RBP8.04□□□□□ -1.12
NECAP1-201ENST00000339754 ST3GAL6Q9Y274 331 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 SPAG17Q6Q759 2223 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 COL5A1P20908 1838 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-201ENST00000339754 TRBV11-1A0A0K0K1C0 115 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 SLC22A20A6NK97 555 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 MLNRO43193 412 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 PDCD6O75340 191 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 TNFP01375 233 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 WNT2P09544 360 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 ESDP10768 282 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 ADMP35318 185 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 C17orf67Q0P5P2 114 aa8.04□□□□□ -1.12
NECAP1-201ENST00000339754 SNAI3Q3KNW1 292 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms