RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 LRTM2Q8N967 370 aa13.8□□□□□ -0.2
SCARB1-202ENST00000339570 THOC3Q96J01 351 aaKnown RBP13.8□□□□□ -0.2
SCARB1-202ENST00000339570 IGLV3-32A0A0A0MS00 114 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 CD300LBA8K4G0 201 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 FAM166BA8MTA8 275 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 RPL36A-HNRNPH2H7BZ11 118 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 TFF1P04155 84 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 GLIPR1P48060 266 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 DAZAP2Q15038 168 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 TMPRSS7Q7RTY8 843 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 ZNF808Q8N4W9 903 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 GNPNAT1Q96EK6 184 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 PRRG4Q9BZD6 226 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 RBKSQ9H477 322 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 C12orf49Q9H741 205 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 GPR35Q9HC97 309 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 PSENENQ9NZ42 101 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 A0A087X0M5 115 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 IGHV1-45A0A0A0MS14 117 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 A0A1B0GX30 115 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 C9J4A7 227 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 CA11O75493 328 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 CELA3AP09093 270 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 MMP7P09237 267 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 PAX9P55771 341 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 PRSS8Q16651 343 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 TMEM211Q6ICI0 200 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 HIST3H2BBQ8N257 126 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 HIST1H2AAQ96QV6 131 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 ELOVL1Q9BW60 279 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 HES7Q9BYE0 225 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 TREM2Q9NZC2 230 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 OR14J1Q9UGF5 321 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 NOSIPQ9Y314 301 aaKnown RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 SMCO3A2RU48 225 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 MRPL33O75394 65 aaKnown RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 RHBDL1O75783 438 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 SNRPCP09234 159 aaKnown RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 HNF1AP20823 631 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 COL19A1Q14993 1142 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 ZNF385CQ66K41 422 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 MKXQ8IYA7 352 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 OR10J5Q8NHC4 309 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 RBMXL1Q96E39 390 aaKnown RBP13.79□□□□□ -0.2
SCARB1-202ENST00000339570 SMIM7Q9BQ49 75 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 Q9N2K0 584 aa13.79□□□□□ -0.2
SCARB1-202ENST00000339570 CBR3O75828 277 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 CLDN1O95832 211 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 COX6A1P12074 109 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 IDH3GP51553 393 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-202ENST00000339570 RAC3P60763 192 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 HIST1H3AP68431 136 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 DMRTC2Q8IXT2 367 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-202ENST00000339570 CA5BP1Q8WTZ4 195 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 C14orf144Q96I85 54 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 PRDM13Q9H4Q3 707 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 ROS1P08922 2347 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 SEC14L6B5MCN3 397 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 NDUFB7P17568 137 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 TAS2R30P59541 319 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 FIP1L1Q6UN15 594 aaKnown RBP13.78□□□□□ -0.2
SCARB1-202ENST00000339570 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
SCARB1-202ENST00000339570 IFI44Q8TCB0 444 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 YPEL4Q96NS1 127 aa13.78□□□□□ -0.2
SCARB1-202ENST00000339570 LOC102725191A0A1B0GVB3 256 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 ZNF503-AS2A6NEH8 195 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 OR6C6A6NF89 314 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 CST2P09228 141 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 ZNF726P1Q15940 193 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 LTC4SQ16873 150 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 PLPPR1Q8TBJ4 325 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 LHX4Q969G2 390 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 MALSU1Q96EH3 234 aa13.77□□□□□ -0.2
SCARB1-202ENST00000339570 PINLYPA6NC86 204 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 KRASP01116 189 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 CA6P23280 308 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 CEBPDP49716 269 aaPredicted RBP13.77□□□□□ -0.21
SCARB1-202ENST00000339570 LINC00205P59089 165 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 NMSQ5H8A3 153 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 CXorf67Q86X51 503 aaPredicted RBP13.77□□□□□ -0.21
SCARB1-202ENST00000339570 WASF3Q9UPY6 502 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 GVINP1Q7Z2Y8 2422 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 ZNF816Q0VGE8 651 aaPredicted RBP13.77□□□□□ -0.21
SCARB1-202ENST00000339570 EIF3IQ13347 325 aaKnown RBP13.77□□□□□ -0.21
SCARB1-202ENST00000339570 ZNF506Q5JVG8 444 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 MRPL14Q6P1L8 145 aaKnown RBP13.77□□□□□ -0.21
SCARB1-202ENST00000339570 TUSC5Q8IXB3 177 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 TMEM204Q9BSN7 226 aa13.77□□□□□ -0.21
SCARB1-202ENST00000339570 CLDN34H7C241 214 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 DKK1O94907 266 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 HSPB1P04792 205 aaKnown RBP13.76□□□□□ -0.21
SCARB1-202ENST00000339570 F2RP25116 425 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 APLNRP35414 380 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 P2RY6Q15077 328 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 FAM90A2PQ658T7 463 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 CYB5R2Q6BCY4 276 aa13.76□□□□□ -0.21
SCARB1-202ENST00000339570 RCC1LQ96I51 464 aaKnown RBP13.76□□□□□ -0.21
SCARB1-202ENST00000339570 DEPPQ9NTK1 212 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms