RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 MAGEB3O15480 346 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 RRP9O43818 475 aaKnown RBP12.25□□□□□ -0.45
LINC01116-202ENST00000339037 LALBAP00709 142 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 ECI1P42126 302 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 CDX1P47902 265 aaPredicted RBP12.25□□□□□ -0.45
LINC01116-202ENST00000339037 CCDC58Q4VC31 144 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 RNF152Q8N8N0 203 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 Q8N9W7 124 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 OR13C5Q8NGS8 318 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
LINC01116-202ENST00000339037 SACSQ9NZJ4 4579 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 C3orf84H3BNL1 204 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 OR7C1O76099 320 aaPredicted RBP12.24□□□□□ -0.45
LINC01116-202ENST00000339037 CDRT1O95170 752 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 HTR3BO95264 441 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 CD2P06729 351 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 ELANEP08246 267 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 GZMHP20718 246 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 IL3RAP26951 378 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 DCKP27707 260 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 LRRC36Q1X8D7 754 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 ASCL4Q6XD76 172 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 SUMF2Q8NBJ7 301 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 Q8NFD4 153 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 CLEC2DQ9UHP7 191 aa12.24□□□□□ -0.45
LINC01116-202ENST00000339037 TENM2Q9NT68 2774 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 TMEM30CPA0ZSE6 113 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 SDCBPO00560 298 aaPredicted RBP12.23□□□□□ -0.45
LINC01116-202ENST00000339037 MOSP00540 346 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 VDAC1P21796 283 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 DDI2Q5TDH0 399 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 TMPRSS11AQ6ZMR5 421 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 LINC00311Q8N616 119 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 C8orf31Q8N9H6 132 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 TMEM104Q8NE00 496 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 OR8H1Q8NGG4 311 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 OR52M1Q8NGK5 317 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 C4orf3Q8WVX3 66 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 CYGBQ8WWM9 190 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 RTN4IP1Q8WWV3 396 aaPredicted RBP12.23□□□□□ -0.45
LINC01116-202ENST00000339037 SMIM19Q96E16 107 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 ASCL2Q99929 193 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 RASL11BQ9BPW5 248 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 PLSCR3Q9NRY6 295 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 SCOCQ9UIL1 159 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 DIMT1Q9UNQ2 313 aaKnown RBP12.23□□□□□ -0.45
LINC01116-202ENST00000339037 ST3GAL6Q9Y274 331 aa12.23□□□□□ -0.45
LINC01116-202ENST00000339037 MAGEA13PA6NCF6 341 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 OGG1O15527 345 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 IGHG4P01861 327 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 CD1BP29016 333 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 SOX6P35712 828 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 RBM11P57052 281 aaKnown RBP12.22□□□□□ -0.45
LINC01116-202ENST00000339037 CFHR3Q02985 330 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 FHL3Q13643 280 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 ZNF260Q3ZCT1 412 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 NHLRC3Q5JS37 347 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 ZFP41Q8N8Y5 198 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 UBALD1Q8TB05 177 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 ARL11Q969Q4 196 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 ST6GALNAC6Q969X2 333 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 S1PR3Q99500 378 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 HSPB9Q9BQS6 159 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 GFOD1Q9NXC2 390 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 BABAM2Q9NXR7 383 aa12.22□□□□□ -0.45
LINC01116-202ENST00000339037 ZNF256Q9Y2P7 627 aaPredicted RBP12.22□□□□□ -0.45
LINC01116-202ENST00000339037 A0A1W2PP11 408 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 IRGMA1A4Y4 181 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 C15orf65H3BRN8 121 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 GEMIN2O14893 280 aaKnown RBP12.21□□□□□ -0.45
LINC01116-202ENST00000339037 MYL12AP19105 171 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 SERPINA2P20848 420 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 BDKRB2P30411 391 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 ZNF93P35789 620 aaPredicted RBP12.21□□□□□ -0.45
LINC01116-202ENST00000339037 PPP3R1P63098 170 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 ADARB1P78563 741 aaKnown RBP12.21□□□□□ -0.45
LINC01116-202ENST00000339037 LINC00596Q86U02 117 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 FAM71E2Q8N5Q1 922 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 ZNF485Q8NCK3 441 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 OR52N1Q8NH53 320 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 NEK7Q8TDX7 302 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 EDARADDQ8WWZ3 215 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 GHSRQ92847 366 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 IL36GQ9NZH8 169 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 ING4Q9UNL4 249 aa12.21□□□□□ -0.45
LINC01116-202ENST00000339037 EXOSC1Q9Y3B2 195 aaKnown RBP12.21□□□□□ -0.45
LINC01116-202ENST00000339037 TRAV8-7A0A075B6U6 113 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 IGHV3-43A0A0B4J1X8 118 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 TRBV5-5A0A0J9YX44 114 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 ZNF736B4DX44 427 aaPredicted RBP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 TXNL1O43396 289 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 ORC5O43913 435 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 CSTBP04080 98 aaKnown RBP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 IGF1P05019 195 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 OR5H8P0DN80 308 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 IGHV3-43DP0DP04 118 aa12.2□□□□□ -0.46
LINC01116-202ENST00000339037 IGFBP3P17936 291 aaPredicted RBP12.2□□□□□ -0.46
LINC01116-202ENST00000339037 PSMB8P28062 276 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms