RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 NKX2-6A6NCS4 301 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM88Q6PEY1 159 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 IL34Q6ZMJ4 242 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF826PQ6ZT77 177 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 KLF14Q8TD94 323 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-202ENST00000338368 TM2D1Q9BX74 207 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 C5orf66Q9H5L9 145 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 PIPOXQ9P0Z9 390 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 hADV38S2A0JD32 116 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 ERVH48-1M5A8F1 160 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 IGHV3-13P01766 116 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 IGHV3-7P01780 117 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 THBS3P49746 956 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 LHX2P50458 406 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 OOEPA6NGQ2 149 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 OR2H2O95918 312 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 PSG2P11465 335 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM267Q0VDI3 215 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-202ENST00000338368 LAMTOR1Q6IAA8 161 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 DTD1Q8TEA8 209 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 OR6C3Q9NZP0 311 aa5.42□□□□□ -1.54
PRKDC-202ENST00000338368 TRIM77I1YAP6 450 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 NHLH2Q02577 135 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 ANKRD55Q3KP44 614 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 MOGAT3Q86VF5 341 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 MALSU1Q96EH3 234 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 NBASA2RRP1 2371 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 MED19A0JLT2 244 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-202ENST00000338368 LGALS4P56470 323 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 TUSC1Q2TAM9 212 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 HIST2H3PS2Q5TEC6 136 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 NANPQ8TBE9 248 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 SSUH2Q9Y2M2 353 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 URGCP-MRPS24S4R325 110 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 FCGR3BO75015 233 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 ZBTB34Q8NCN2 500 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 OR8G5Q8NG78 346 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 POMT1Q9Y6A1 747 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM218A2RU14 115 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 OR5H1A6NKK0 313 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 MBP02144 154 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 DVL1P1P54792 670 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-202ENST00000338368 NAAAQ02083 359 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 RTL8BQ17RB0 113 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 LINC00596Q86U02 117 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 FAM89BQ8N5H3 189 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 COMMD1Q8N668 190 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 ADAMTS17Q8TE56 1095 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 WISP1O95388 367 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 CD81P60033 236 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 FLI1Q01543 452 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-202ENST00000338368 SAXO1Q8IYX7 474 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 GPHA2Q96T91 129 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 SFTA3P0C7M3 94 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 PRDX2P32119 198 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 TNFSF10P50591 281 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 UCP3P55916 312 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 CLDN18P56856 261 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 Q0VFX4 171 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 IL24Q13007 206 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 NARFLQ9H6Q4 476 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 J3QW42 95 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 FGFBP3Q8TAT2 258 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 MT-ND4LP03901 98 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 H3F3AP84243 136 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 SLC38A11Q08AI6 406 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 SIGIRRQ6IA17 410 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 GGNQ86UU5 652 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 BPIFCQ8NFQ6 507 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 WIPI2Q9Y4P8 454 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 LIPGQ9Y5X9 500 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 ATP6V1G2-DDX39BF2Z307 99 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 M0QZ24 198 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 KCNAB3O43448 404 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 OR10X1Q8NGY0 326 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 OR5P3Q8WZ94 311 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 NABP1Q96AH0 204 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 REPIN1Q9BWE0 567 aaKnown RBP5.41□□□□□ -1.54
PRKDC-202ENST00000338368 TMEM222Q9H0R3 208 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 CCL1P22362 96 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 PPP1CCP36873 323 aaKnown RBP5.41□□□□□ -1.54
PRKDC-202ENST00000338368 FOXG1P55316 489 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF787Q6DD87 383 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 STPG2Q8N412 459 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 LYZL4Q96KX0 146 aa5.41□□□□□ -1.54
PRKDC-202ENST00000338368 FOXD3Q9UJU5 478 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-202ENST00000338368 C16orf97H3BN30 126 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 KCNIP4Q6PIL6 250 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 POM121L2Q96KW2 1035 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 ACTR3CQ9C0K3 210 aaPredicted RBP5.4□□□□□ -1.54
PRKDC-202ENST00000338368 MS4A5Q9H3V2 200 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 MED9Q9NWA0 146 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 LY6G6EA0A0G2JKS1 128 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 GNG10P50151 68 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF154Q13106 437 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 RBMXL3Q8N7X1 1067 aaKnown RBP5.4□□□□□ -1.54
PRKDC-202ENST00000338368 C2CD4CQ8TF44 421 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 WBP1Q96G27 269 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 ZNF665Q9H7R5 613 aa5.4□□□□□ -1.54
PRKDC-202ENST00000338368 RNF122Q9H9V4 155 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms