RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 LINC00574Q9H8X3 128 aa17.71■□□□□ 0.43
TPM1-204ENST00000334895 ZNF469Q96JG9 3925 aaPredicted RBP17.71■□□□□ 0.43
TPM1-204ENST00000334895 CR1P17927 2039 aa17.71■□□□□ 0.42
TPM1-204ENST00000334895 KBTBD11-OT1A0A1B0GTJ5 212 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 NPIPB11E5RHQ5 1161 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 SDCBPO00560 298 aaPredicted RBP17.7■□□□□ 0.42
TPM1-204ENST00000334895 RAB3DO95716 219 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 HEXAP06865 529 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 AKAIN1P0CW23 69 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 TAS2R46P59540 309 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 AP3S2P59780 193 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 ARPC4P59998 168 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 C11orf91Q3C1V1 193 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 FAM53AQ6NSI3 398 aaPredicted RBP17.7■□□□□ 0.42
TPM1-204ENST00000334895 OVCH2Q7RTZ1 564 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 OR5H2Q8NGV7 314 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 REG4Q9BYZ8 158 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 TAS2R3Q9NYW6 316 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 OPN4Q9UHM6 478 aa17.7■□□□□ 0.42
TPM1-204ENST00000334895 PPIAL4CA0A0B4J2A2 164 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 ZNF729A6NN14 1252 aaPredicted RBP17.69■□□□□ 0.42
TPM1-204ENST00000334895 MMP23AO75900 390 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 ZNF735P0CB33 412 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 PPIAL4GP0DN37 164 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 TBPP20226 339 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 OMGP23515 440 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 ERVFRD-1P60508 538 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 LOXL1Q08397 574 aaPredicted RBP17.69■□□□□ 0.42
TPM1-204ENST00000334895 ASAH1Q13510 395 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 CDK10Q15131 360 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 RNASE10Q5GAN6 216 aaKnown RBP17.69■□□□□ 0.42
TPM1-204ENST00000334895 VAX1Q5SQQ9 334 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 CD276Q5ZPR3 534 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 C11orf42Q8N5U0 333 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 ZFAND2BQ8WV99 257 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 ZNF714Q96N38 554 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 C11orf54Q9H0W9 315 aaPredicted RBP17.69■□□□□ 0.42
TPM1-204ENST00000334895 YLPM1P49750 1951 aaKnown RBP17.69■□□□□ 0.42
TPM1-204ENST00000334895 ZNF728P0DKX0 622 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 ACTBL2Q562R1 376 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 MAPK1IP1LQ8NDC0 245 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 OR56B4Q8NH76 319 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 IL1F10Q8WWZ1 152 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 COX4I2Q96KJ9 171 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 SLC6A7Q99884 636 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 MMP26Q9NRE1 261 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 EHFQ9NZC4 300 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 OR1A1Q9P1Q5 309 aa17.69■□□□□ 0.42
TPM1-204ENST00000334895 POLR3KQ9Y2Y1 108 aaPredicted RBP17.69■□□□□ 0.42
TPM1-204ENST00000334895 F2RL2O00254 374 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 FOXH1O75593 365 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 BTCP35070 178 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 UTF1Q5T230 341 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 DEDD2Q8WXF8 326 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 C1orf159Q96HA4 380 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 LPAR2Q9HBW0 351 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 NECAP2Q9NVZ3 263 aa17.68■□□□□ 0.42
TPM1-204ENST00000334895 TRBV6-7A0A0A0MS04 114 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 BET1O15155 118 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 SPINT2O43291 252 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 LYRM1O43325 122 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 OR5H8P0DN80 308 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 OR3A3P47888 321 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 PRAMEF5Q5TYX0 476 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 ZNF660Q6AZW8 331 aaPredicted RBP17.67■□□□□ 0.42
TPM1-204ENST00000334895 OR52L2PQ8NGH6 319 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 GALMQ96C23 342 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 GAL3ST2Q9H3Q3 398 aa17.67■□□□□ 0.42
TPM1-204ENST00000334895 IGHV2-70DA0A0C4DH43 119 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 C17orf98A8MV24 154 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 AMY2AP04746 511 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 LIPFP07098 398 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 LOXL3P58215 753 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 GNMTQ14749 295 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 MEF2DQ14814 521 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 LTC4SQ16873 150 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 C7orf50Q9BRJ6 194 aaKnown RBP17.66■□□□□ 0.42
TPM1-204ENST00000334895 SLC23A1Q9UHI7 598 aa17.66■□□□□ 0.42
TPM1-204ENST00000334895 IGHV3-43A0A0B4J1X8 118 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 DIRAS3O95661 229 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 CTXN2P0C2S0 81 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 IGHV3-43DP0DP04 118 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 HTD2P86397 168 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 HEPN1Q6WQI6 88 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 SPNS3Q6ZMD2 512 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 OR51S1Q8NGJ8 323 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 PARP12Q9H0J9 701 aaKnown RBP17.65■□□□□ 0.42
TPM1-204ENST00000334895 MCUBQ9NWR8 336 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 IDI2-AS1Q9NZ38 188 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 FLNAP21333 2647 aaKnown RBP17.65■□□□□ 0.42
TPM1-204ENST00000334895 ENSAO43768 121 aaKnown RBP17.65■□□□□ 0.42
TPM1-204ENST00000334895 NFYAP23511 347 aaPredicted RBP17.65■□□□□ 0.42
TPM1-204ENST00000334895 FPR2P25090 351 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 FAUP35544 74 aaKnown RBP17.65■□□□□ 0.42
TPM1-204ENST00000334895 Q8N7P7 452 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 POC5Q8NA72 575 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 TMPRSS13Q9BYE2 586 aa17.65■□□□□ 0.42
TPM1-204ENST00000334895 WNK2Q9Y3S1 2297 aa17.64■□□□□ 0.41
TPM1-204ENST00000334895 H1FOOQ8IZA3 346 aaPredicted RBP17.64■□□□□ 0.41
TPM1-204ENST00000334895 ARRDC1Q8N5I2 433 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms